C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: matrix-remodelling associated 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162576 MXRA8 9606 - 1:1352689-1361777 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309212 MXRA8-001 1352691-1358535 protein_coding
  ENST00000342753 MXRA8-201 1352689-1358794 protein_coding
  ENST00000445648 MXRA8-003 1352692-1358543 protein_coding
  ENST00000460473 MXRA8-005 1355083-1355512 retained_intron
  ENST00000464351 MXRA8-006 1355004-1355512 retained_intron
  ENST00000473097 MXRA8-007 1353192-1354474 retained_intron
  ENST00000474033 MXRA8-004 1352689-1354264 retained_intron
  ENST00000476718 MXRA8-009 1353439-1355016 retained_intron
  ENST00000477278 MXRA8-002 1352692-1361777 protein_coding
  ENST00000478517 MXRA8-008 1353215-1354247 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309212ENST00000342753ENST00000445648ENST00000473097ENST00000474033ENST00000476718ENST00000478517
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309212 67.272±0.00 25.672±0.00 0.767±0.00 1.574±0.45 68.639±60.05 24.744±22.36 4.453±3.24 9.066±8.30 4.067±2.35 44.255±0.00 13.475±0.00 30.547±26.69 64.259±18.45 26.322±21.29
ENST00000342753 N/A N/A N/A N/A N/A N/A N/A 0.650±0.00 N/A N/A N/A N/A N/A N/A
ENST00000445648 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.612±0.00 N/A 15.685±0.00 30.521±0.00 10.167±0.00
ENST00000473097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.613±0.00 17.720±0.00 7.079±0.00
ENST00000474033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.473±0.00 49.515±22.89 22.320±0.00 N/A
ENST00000476718 23.871±0.00 N/A N/A N/A 1.843±0.00 N/A N/A N/A N/A N/A N/A 6.395±0.00 N/A 9.777±0.00
ENST00000478517 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.468±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MO CIL_0005MO_0002 CGP 1:1335276-1361777

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0009986 ISS cell surface
GO:0016021 IEA integral component of membrane
GO:0060857 ISS establishment of glial blood-brain barrier
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062129 mxra8b matrix-remodelling associated 8b protein_coding Danio_rerio
ENSDARG00000062222 mxra8a matrix-remodelling associated 8a protein_coding Danio_rerio
ENSMUSG00000029070 Mxra8 matrix-remodelling associated 8 protein_coding Mus_musculus

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