C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: matrix-remodelling associated 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029070 Mxra8 10090 + 4:155839680-155844088 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030947 Mxra8-001 155839726-155844088 protein_coding
  ENSMUST00000126487 Mxra8-005 155842472-155843577 retained_intron
  ENSMUST00000132142 Mxra8-006 155842923-155843765 processed_transcript
  ENSMUST00000133592 Mxra8-007 155839830-155841280 retained_intron
  ENSMUST00000141766 Mxra8-004 155842451-155843464 retained_intron
  ENSMUST00000141883 Mxra8-002 155839680-155842130 protein_coding
  ENSMUST00000143886 Mxra8-003 155842304-155842974 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030947ENSMUST00000126487ENSMUST00000132142ENSMUST00000141883
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030947 116.774±14.76 37.777±8.17 117.581±24.49 6.454±4.04 61.083±15.06 44.031±8.84 28.644±3.76 31.074±2.35 5.253±1.78 319.015±57.51 6.192±1.74 89.024±37.21 12.841±4.74 39.654±21.38
ENSMUST00000126487 N/A N/A N/A 6.853±0.00 21.208±0.00 N/A N/A N/A N/A N/A N/A 57.364±45.58 43.844±11.32 31.697±0.00
ENSMUST00000132142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 50.629±11.28 N/A N/A
ENSMUST00000141883 30.491±1.63 20.156±4.10 52.449±0.00 3.663±1.09 32.741±6.74 22.902±8.83 N/A 9.466±1.46 1.852±0.65 114.528±11.09 N/A 37.249±5.09 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003D0 CIL_0003D0_0002 CGP 4:155831272-155844088
CIL_0003D7 CIL_0003D7_0002 CGP 4:155839680-155859303

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0060857 IEP establishment of glial blood-brain barrier
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062129 mxra8b matrix-remodelling associated 8b protein_coding Danio_rerio
ENSDARG00000062222 mxra8a matrix-remodelling associated 8a protein_coding Danio_rerio
ENSG00000162576 MXRA8 matrix-remodelling associated 8 protein_coding Homo_sapiens

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