C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acid phosphatase 6, lysophosphatidic
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162836 ACP6 9606 - 1:147629652-147670496 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000392988 ACP6-009 147651974-147670278 protein_coding
  ENST00000460583 ACP6-003 147647368-147650682 retained_intron
  ENST00000487562 ACP6-004 147649817-147670048 protein_coding
  ENST00000493129 ACP6-002 147655226-147670452 protein_coding
  ENST00000583509 ACP6-001 147642235-147670496 protein_coding
  ENST00000609196 ACP6-005 147629652-147659001 protein_coding
  ENST00000611629 ACP6-006 147652549-147659677 protein_coding
  ENST00000613673 ACP6-010 147647368-147670283 retained_intron
  ENST00000614551 ACP6-008 147652587-147659349 retained_intron
  ENST00000620634 ACP6-007 147652514-147670279 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000460583ENST00000487562ENST00000493129ENST00000583509ENST00000609196ENST00000611629ENST00000613673ENST00000620634
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000460583 2.058±0.00 1.458±0.00 N/A 1.191±0.00 2.075±0.00 2.189±0.00 0.551±0.00 7.391±0.00 3.346±0.00 1.688±0.00 1.462±0.06 6.159±0.00 1.544±0.66 2.257±0.00
ENST00000487562 N/A N/A N/A N/A N/A N/A 0.410±0.00 N/A 0.660±0.00 N/A N/A N/A 0.332±0.00 N/A
ENST00000493129 N/A N/A N/A N/A N/A N/A N/A N/A 3.066±0.00 N/A N/A N/A 0.929±0.00 2.463±0.00
ENST00000583509 N/A 0.260±0.00 1.608±0.00 0.212±0.02 0.248±0.00 0.184±0.04 0.059±0.00 0.808±0.00 0.303±0.00 0.234±0.00 0.062±0.00 1.079±0.64 0.127±0.02 0.441±0.25
ENST00000609196 N/A 0.610±0.00 N/A 0.363±0.00 0.699±0.00 0.502±0.05 N/A 1.809±0.84 N/A N/A 0.228±0.00 2.940±1.51 0.406±0.00 1.644±0.00
ENST00000611629 1.618±0.00 2.273±0.00 N/A N/A 2.251±0.00 N/A 0.671±0.00 N/A N/A N/A 2.052±0.00 N/A 1.778±0.12 2.431±0.00
ENST00000613673 0.260±0.00 0.626±0.00 N/A 0.330±0.00 0.446±0.18 0.319±0.11 0.099±0.00 N/A N/A 0.620±0.14 N/A 1.451±0.77 0.074±0.00 0.622±0.00
ENST00000620634 N/A N/A N/A N/A N/A N/A N/A N/A 2.221±0.00 N/A N/A N/A 1.727±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0003993 IEA acid phosphatase activity
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006644 IMP phospholipid metabolic process
GO:0016311 IEA dephosphorylation
GO:0052642 IDA lysophosphatidic acid phosphatase activity
GO:2001311 IDA lysobisphosphatidic acid metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040064 acp6 acid phosphatase 6, lysophosphatidic protein_coding Danio_rerio
ENSMUSG00000028093 Acp6 acid phosphatase 6, lysophosphatidic protein_coding Mus_musculus

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