C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acid phosphatase 6, lysophosphatidic
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028093 Acp6 10090 + 3:97158777-97176574 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000090759 Acp6-001 97158777-97176574 protein_coding
  ENSMUST00000126438 Acp6-004 97159103-97168310 retained_intron
  ENSMUST00000133965 Acp6-003 97159103-97167049 retained_intron
  ENSMUST00000139898 Acp6-007 97171150-97173898 retained_intron
  ENSMUST00000143234 Acp6-002 97172642-97176518 retained_intron
  ENSMUST00000146143 Acp6-006 97168094-97173869 retained_intron
  ENSMUST00000149900 Acp6-005 97167377-97168452 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090759ENSMUST00000133965ENSMUST00000143234ENSMUST00000146143
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090759 14.207±3.61 20.758±9.42 12.903±1.25 2.144±0.80 9.113±3.24 18.911±2.34 7.553±1.67 21.430±3.24 11.119±3.95 4.419±0.81 10.188±1.47 10.532±4.65 6.535±2.28 1.973±1.10
ENSMUST00000133965 8.298±0.00 N/A N/A N/A 4.061±0.35 6.992±1.25 2.763±0.17 5.505±0.00 N/A N/A N/A 5.481±0.05 N/A 1.094±0.07
ENSMUST00000143234 2.330±0.00 N/A N/A 1.143±0.24 3.217±0.68 N/A N/A 5.472±0.56 1.656±0.00 1.913±0.10 N/A 2.740±0.37 N/A 0.727±0.07
ENSMUST00000146143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.670±0.00 1.290±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WY CIL_0006WY_0002 CGP 3:97032416-97176574

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0003993 IEA acid phosphatase activity
GO:0005739 IDA mitochondrion
GO:0016311 IEA dephosphorylation
GO:0052642 ISS lysophosphatidic acid phosphatase activity
GO:2001311 ISS lysobisphosphatidic acid metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040064 acp6 acid phosphatase 6, lysophosphatidic protein_coding Danio_rerio
ENSG00000162836 ACP6 acid phosphatase 6, lysophosphatidic protein_coding Homo_sapiens

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