C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: xin actin-binding repeat containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163092 XIRP2 9606 + 2:166888487-167259753 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295237 XIRP2-201 167248682-167259749 protein_coding
  ENST00000409043 XIRP2-002 166888487-167259749 protein_coding
  ENST00000409195 XIRP2-001 166888487-167259753 protein_coding
  ENST00000409273 XIRP2-005 167187283-167259749 protein_coding
  ENST00000409605 XIRP2-007 167187283-167259749 protein_coding
  ENST00000409728 XIRP2-006 166888487-167259749 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295237ENST00000409043ENST00000409195ENST00000409273ENST00000409605
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295237 0.018±0.00 0.022±0.00 N/A 0.007±0.00 2.786±0.00 0.031±0.00 34.281±0.00 0.011±0.00 N/A N/A 175.634±0.00 0.014±0.00 0.037±0.00 7.394±0.00
ENST00000409043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A 3.449±0.00
ENST00000409195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.267±0.00
ENST00000409273 0.015±0.00 0.001±0.00 0.007±0.00 0.004±0.00 0.517±0.18 0.062±0.00 34.622±7.57 N/A 0.005±0.00 0.234±0.00 50.420±18.82 0.006±0.00 0.008±0.00 4.480±0.00
ENST00000409605 0.019±0.00 N/A N/A 0.028±0.00 2.154±0.00 0.040±0.00 N/A 0.014±0.00 N/A 0.096±0.00 53.202±0.00 0.012±0.00 0.099±0.08 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HO CIL_0000HO_0001 CGP 2:166888487-167874041

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003281 IEA ventricular septum development
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0030018 IEA Z disc
GO:0030036 IEA actin cytoskeleton organization
GO:0030054 IEA cell junction
GO:0045216 IEA cell-cell junction organization
GO:0051393 IEA alpha-actinin binding
GO:0055008 IEA cardiac muscle tissue morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071113 xirp2a xin actin-binding repeat containing 2a protein_coding Danio_rerio
ENSDARG00000091090 xirp2b xin actin-binding repeat containing 2b protein_coding Danio_rerio
ENSMUSG00000027022 Xirp2 xin actin-binding repeat containing 2 protein_coding Mus_musculus

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