C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000HO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163092-ENSG00000172318 CGP 9606 2:166888487-167874041
GeneTranscriptPositionBiotype
ENSG00000163092 (XIRP2)
xin actin-binding repeat containing 2 		ENST00000295237 (XIRP2-201) 167248682-167259749 protein_coding
ENST00000409043 (XIRP2-002) 166888487-167259749 protein_coding
ENST00000409195 (XIRP2-001) 166888487-167259753 protein_coding
ENST00000409273 (XIRP2-005) 167187283-167259749 protein_coding
ENST00000409605 (XIRP2-007) 167187283-167259749 protein_coding
ENST00000409728 (XIRP2-006) 166888487-167259749 protein_coding
ENSG00000172318 (B3GALT1)
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 		ENST00000392690 (B3GALT1-001) 167868948-167874041 protein_coding
ENSG00000214211 (CTAGE14P)
CTAGE family, member 14, pseudogene 		ENST00000397819 (CTAGE14P-001) 167713663-167716065 processed_pseudogene
ENSG00000228222 (AC074363.1)
 ENST00000442316 (AC074363.1-001) 167293171-167558333 lincRNA
ENSG00000235335 (AC016723.4)
 ENST00000430546 (AC016723.4-002) 167814774-167869914 antisense
ENST00000436982 (AC016723.4-001) 167815053-167941144 antisense
ENSG00000254552 (XIRP2-AS1)
XIRP2 antisense RNA 1 		ENST00000525330 (XIRP2-AS1-001) 167123904-167140955 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0000HO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027022-ENSMUSG00000034780 CGP 10090 2:67446002-68122689
GeneTranscriptPositionBiotype
ENSMUSG00000027022 (Xirp2)
xin actin-binding repeat containing 2 		ENSMUST00000028410 (Xirp2-201) 67446002-67526606 protein_coding
ENSMUST00000112347 (Xirp2-001) 67446002-67526614 protein_coding
ENSMUSG00000034780 (B3galt1)
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 		ENSMUST00000042456 (B3galt1-001) 68104671-68120514 protein_coding
ENSMUST00000112346 (B3galt1-201) 68117713-68122689 protein_coding
ENSMUST00000180887 (B3galt1-002) 67748212-68118150 protein_coding
ENSMUST00000188614 (B3galt1-003) 67565871-67810894 processed_transcript
ENSMUSG00000081257 (Gm13607)
predicted gene 13607 		ENSMUST00000117875 (Gm13607-001) 68081791-68082329 processed_pseudogene
ENSMUSG00000083910 (Gm13604)
predicted gene 13604 		ENSMUST00000119332 (Gm13604-001) 67707290-67707771 processed_pseudogene
ENSMUSG00000087467 (Gm13601)
predicted gene 13601 		ENSMUST00000142314 (Gm13601-001) 67491044-67516525 antisense
ENSMUSG00000097067 (Gm26743)
predicted gene, 26743 		ENSMUST00000180913 (Gm26743-001) 67677031-67687282 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HO_0001ENSG00000163092ENST00000295237ENST00000409043ENST00000409195ENST00000409273ENST00000409605ENST00000409728ENSG00000172318ENST00000392690ENSG00000214211ENST00000397819ENSG00000228222ENST00000442316ENSG00000235335ENST00000430546ENST00000436982ENSG00000254552ENST00000525330CIL_0000HO_0002ENSMUSG00000027022ENSMUST00000028410ENSMUST00000112347ENSMUSG00000034780ENSMUST00000042456ENSMUST00000112346ENSMUST00000180887ENSMUST00000188614ENSMUSG00000081257ENSMUST00000117875ENSMUSG00000083910ENSMUST00000119332ENSMUSG00000087467ENSMUST00000142314ENSMUSG00000097067ENSMUST00000180913
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HO_0001ENSG00000163092ENST00000295237ENST00000409043ENST00000409195ENST00000409273ENST00000409605ENSG00000172318ENST00000392690ENSG00000214211ENST00000397819ENSG00000228222ENST00000442316ENSG00000235335ENST00000430546ENSG00000254552ENST00000525330CIL_0000HO_0002ENSMUSG00000027022ENSMUST00000028410ENSMUST00000112347ENSMUSG00000034780ENSMUST00000042456ENSMUST00000112346ENSMUST00000180887ENSMUST00000188614ENSMUSG00000081257ENSMUST00000117875ENSMUSG00000083910ENSMUST00000119332ENSMUSG00000087467ENSMUST00000142314ENSMUSG00000097067ENSMUST00000180913
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163092 ENST00000295237 0.018±0.00 0.022±0.00 N/A 0.007±0.00 2.786±0.00 0.031±0.00 34.281±0.00 0.011±0.00 N/A N/A 175.634±0.00 0.014±0.00 0.037±0.00 7.394±0.00
ENST00000409043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A 3.449±0.00
ENST00000409195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.267±0.00
ENST00000409273 0.015±0.00 0.001±0.00 0.007±0.00 0.004±0.00 0.517±0.18 0.062±0.00 34.622±7.57 N/A 0.005±0.00 0.234±0.00 50.420±18.82 0.006±0.00 0.008±0.00 4.480±0.00
ENST00000409605 0.019±0.00 N/A N/A 0.028±0.00 2.154±0.00 0.040±0.00 N/A 0.014±0.00 N/A 0.096±0.00 53.202±0.00 0.012±0.00 0.099±0.08 N/A
ENST00000409728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172318 ENST00000392690 0.161±0.00 N/A N/A 0.622±0.10 0.357±0.00 N/A N/A 0.026±0.00 0.005±0.00 0.057±0.02 0.988±0.00 0.279±0.00 0.014±0.00 N/A
ENSG00000214211 ENST00000397819 N/A N/A 0.119±0.00 0.170±0.00 0.038±0.00 0.677±0.00 0.006±0.00 N/A 0.004±0.00 0.004±0.00 N/A N/A N/A 0.011±0.00
ENSG00000228222 ENST00000442316 N/A N/A N/A 0.188±0.00 N/A N/A 0.091±0.00 N/A N/A N/A N/A 0.204±0.00 N/A 0.036±0.01
ENSG00000235335 ENST00000430546 N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A 0.073±0.03 N/A
ENST00000436982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254552 ENST00000525330 N/A N/A N/A N/A N/A N/A 0.600±0.00 N/A N/A N/A N/A N/A N/A 0.134±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027022 ENSMUST00000028410 0.002±0.00 N/A 0.000±0.00 0.007±0.01 N/A N/A N/A 0.002±0.00 0.001±0.00 0.038±0.00 N/A N/A N/A 0.004±0.00
ENSMUST00000112347 0.002±0.00 N/A 0.000±0.00 0.002±0.00 7.869±1.23 N/A 11.856±2.31 0.266±0.23 0.001±0.00 0.798±0.76 86.515±11.66 N/A N/A 0.004±0.00
ENSMUSG00000034780 ENSMUST00000042456 N/A N/A N/A 0.797±0.00 0.189±0.00 N/A 0.166±0.06 0.048±0.01 N/A N/A N/A 0.048±0.00 0.014±0.00 0.094±0.06
ENSMUST00000112346 1.071±0.38 0.487±0.12 0.277±0.06 6.993±1.90 0.734±0.07 0.227±0.07 0.229±0.04 0.162±0.07 1.154±1.09 0.331±0.03 0.271±0.16 0.232±0.17 0.044±0.03 0.107±0.06
ENSMUST00000180887 N/A N/A N/A 6.604±0.00 N/A N/A N/A N/A N/A 0.600±0.00 N/A 0.145±0.00 0.073±0.00 0.136±0.00
ENSMUST00000188614 N/A 2.772±0.00 N/A N/A N/A 0.246±0.08 N/A 0.280±0.10 N/A N/A N/A 0.779±0.25 0.194±0.00 N/A
ENSMUSG00000081257 ENSMUST00000117875 N/A N/A 0.018±0.00 0.120±0.01 0.293±0.00 N/A N/A 0.082±0.00 0.171±0.04 N/A N/A N/A 0.012±0.00 N/A
ENSMUSG00000083910 ENSMUST00000119332 0.171±0.04 0.302±0.00 0.056±0.03 0.173±0.00 0.161±0.00 N/A N/A 0.107±0.00 0.149±0.13 0.144±0.00 0.278±0.17 0.244±0.08 0.173±0.09 0.268±0.00
ENSMUSG00000087467 ENSMUST00000142314 N/A N/A N/A 0.821±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097067 ENSMUST00000180913 N/A N/A 0.020±0.01 N/A N/A N/A 0.021±0.00 N/A 0.004±0.00 N/A 0.019±0.00 0.205±0.00 0.017±0.01 N/A

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