C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leiomodin 3 (fetal)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163380 LMOD3 9606 - 3:69106872-69123032 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000420581 LMOD3-001 69106872-69122566 protein_coding
  ENST00000475434 LMOD3-004 69108724-69123032 protein_coding
  ENST00000489031 LMOD3-002 69108672-69122595 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000420581ENST00000475434ENST00000489031
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000420581 0.120±0.00 0.241±0.00 0.084±0.04 3.943±0.00 0.120±0.00 25.695±0.00 0.427±0.00 0.078±0.00 0.226±0.00 3.755±0.00 0.088±0.09 0.208±0.01 0.178±0.05
ENST00000475434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.918±0.00
ENST00000489031 N/A N/A N/A N/A 0.066±0.00 15.837±11.81 0.045±0.00 0.442±0.00 0.082±0.00 38.623±27.60 0.033±0.00 0.062±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AZ CIL_0003AZ_0001 CGP 3:69084944-69123032
CIL_0003AY CIL_0003AY_0001 CGP 3:69106872-69542583

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005523 IEA tropomyosin binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0051694 IEA pointed-end actin filament capping

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062662 LMOD3 leiomodin 3 (fetal) protein_coding Danio_rerio
ENSMUSG00000044086 Lmod3 leiomodin 3 (fetal) protein_coding Mus_musculus

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