C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fatty acid binding protein 1, liver
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163586 FABP1 9606 - 2:88122982-88128116 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295834 FABP1-001 88122982-88128116 protein_coding
  ENST00000393750 FABP1-002 88123020-88128049 protein_coding
  ENST00000472846 FABP1-004 88125912-88128059 retained_intron
  ENST00000495375 FABP1-003 88123029-88128041 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000295834ENST00000393750ENST00000472846ENST00000495375
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000295834 0.054±0.00 N/A 5.561±0.00 0.114±0.00 4.728±0.00 191.987±92.05 103.690±56.87 1531.560±0.00 N/A 43.868±45.25 N/A 0.412±0.13
ENST00000393750 N/A N/A N/A 0.009±0.00 N/A 10.509±0.00 2.408±0.00 N/A N/A N/A N/A N/A
ENST00000472846 N/A 0.071±0.00 N/A 0.140±0.00 N/A N/A N/A N/A 0.601±0.00 N/A 0.238±0.00 N/A
ENST00000495375 N/A N/A N/A N/A N/A N/A 1.841±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004I0 CIL_0004I0_0002 CGP 2:88067780-88128116

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 IEA chromatin binding
GO:0005215 IEA transporter activity
GO:0005324 IEA long-chain fatty acid transporter activity
GO:0005504 IEA fatty acid binding
GO:0005515 IEA protein binding
GO:0005543 IEA phospholipid binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0005782 ISS peroxisomal matrix
GO:0005829 IEA cytosol
GO:0006810 IEA transport
GO:0008144 IEA drug binding
GO:0008284 IEA positive regulation of cell proliferation
GO:0008289 IEA lipid binding
GO:0015909 IEA long-chain fatty acid transport
GO:0016209 IDA antioxidant activity
GO:0032000 IEA positive regulation of fatty acid beta-oxidation
GO:0032052 IEA bile acid binding
GO:0043066 IDA negative regulation of apoptotic process
GO:0043154 IDA negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045179 IEA apical cortex
GO:0050892 IEA intestinal absorption
GO:0051345 IEA positive regulation of hydrolase activity
GO:0070062 IDA extracellular vesicular exosome
GO:0070301 IDA cellular response to hydrogen peroxide
GO:0071456 IDA cellular response to hypoxia

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019357 fabp1a fatty acid binding protein 1a, liver protein_coding Danio_rerio
ENSDARG00000059227 fabp1b.1 fatty acid binding protein 1b, tandem duplicate 1 protein_coding Danio_rerio
ENSDARG00000095866 fabp1b.2 fatty acid binding protein 1b, tandem duplicate 2 protein_coding Danio_rerio
ENSMUSG00000054422 Fabp1 fatty acid binding protein 1, liver protein_coding Mus_musculus

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