C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004I0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058549-ENSDARG00000095866 CGP 7955 8:886267-920815
GeneTranscriptPositionBiotype
ENSDARG00000058549 (smyd1b)
SET and MYND domain containing 1b 		ENSDART00000081421 (smyd1b-201) 886267-907978 protein_coding
ENSDARG00000059227 (fabp1b.1)
fatty acid binding protein 1b, tandem duplicate 1 		ENSDART00000149528 (fabp1b.1-001) 918379-920867 protein_coding
ENSDARG00000095866 (fabp1b.2)
fatty acid binding protein 1b, tandem duplicate 2 		ENSDART00000082286 (fabp1b.2-201) 910222-920815 protein_coding
ENSDART00000149179 (fabp1b.2-001) 910208-913733 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004I0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115593-ENSG00000163586 CGP 9606 2:88067780-88128116
GeneTranscriptPositionBiotype
ENSG00000115593 (SMYD1)
SET and MYND domain containing 1 		ENST00000419482 (SMYD1-001) 88067780-88113387 protein_coding
ENST00000438570 (SMYD1-003) 88067862-88112484 protein_coding
ENST00000444564 (SMYD1-002) 88067825-88110854 protein_coding
ENST00000468008 (SMYD1-004) 88083053-88091025 processed_transcript
ENSG00000163586 (FABP1)
fatty acid binding protein 1, liver 		ENST00000295834 (FABP1-001) 88122982-88128116 protein_coding
ENST00000393750 (FABP1-002) 88123020-88128049 protein_coding
ENST00000472846 (FABP1-004) 88125912-88128059 retained_intron
ENST00000495375 (FABP1-003) 88123029-88128041 processed_transcript

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004I0_0001ENSDARG00000058549ENSDART00000081421ENSDARG00000059227ENSDART00000149528ENSDARG00000095866ENSDART00000082286ENSDART00000149179CIL_0004I0_0002ENSG00000115593ENST00000419482ENST00000438570ENST00000444564ENST00000468008ENSG00000163586ENST00000295834ENST00000393750ENST00000472846ENST00000495375
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004I0_0001ENSDARG00000058549ENSDART00000081421ENSDARG00000059227ENSDART00000149528ENSDARG00000095866ENSDART00000082286ENSDART00000149179CIL_0004I0_0002ENSG00000115593ENST00000419482ENST00000438570ENST00000444564ENST00000468008ENSG00000163586ENST00000295834ENST00000393750ENST00000472846ENST00000495375
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000058549 ENSDART00000081421 N/A N/A N/A 1.648±0.35 N/A N/A 149.465±79.21 2.974±0.00 0.037±0.00 N/A 52.086±0.00 N/A N/A N/A
ENSDARG00000059227 ENSDART00000149528 N/A N/A N/A 0.814±0.00 N/A N/A N/A N/A 0.134±0.00 N/A N/A N/A N/A N/A
ENSDARG00000095866 ENSDART00000082286 N/A N/A N/A N/A N/A N/A 5.755±0.00 99.691±0.00 0.093±0.00 N/A N/A N/A N/A N/A
ENSDART00000149179 N/A N/A N/A 0.910±0.52 N/A N/A 43.564±38.38 N/A N/A N/A 5.736±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115593 ENST00000419482 0.016±0.00 0.013±0.00 N/A 0.351±0.00 1.019±0.00 1.468±0.00 58.111±40.95 N/A 0.058±0.05 N/A 17.944±3.56 0.014±0.00 N/A N/A
ENST00000438570 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.420±0.00 N/A N/A N/A N/A
ENST00000444564 N/A N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A 0.073±0.00 N/A 0.031±0.00 N/A N/A
ENST00000468008 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A
ENSG00000163586 ENST00000295834 0.054±0.00 N/A 5.561±0.00 0.114±0.00 4.728±0.00 191.987±92.05 N/A 103.690±56.87 1531.560±0.00 N/A N/A 43.868±45.25 N/A 0.412±0.13
ENST00000393750 N/A N/A N/A 0.009±0.00 N/A 10.509±0.00 N/A 2.408±0.00 N/A N/A N/A N/A N/A N/A
ENST00000472846 N/A 0.071±0.00 N/A 0.140±0.00 N/A N/A N/A N/A N/A 0.601±0.00 N/A N/A 0.238±0.00 N/A
ENST00000495375 N/A N/A N/A N/A N/A N/A N/A 1.841±0.00 N/A N/A N/A N/A N/A N/A

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