C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase, Mg2+/Mn2+ dependent, 1K
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163644 PPM1K 9606 - 4:88257620-88284769 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295908 PPM1K-009 88261871-88284578 protein_coding
  ENST00000505022 PPM1K-007 88278193-88283890 protein_coding
  ENST00000506423 PPM1K-003 88268762-88284561 processed_transcript
  ENST00000508256 PPM1K-004 88262577-88284631 protein_coding
  ENST00000509340 PPM1K-006 88278567-88284261 protein_coding
  ENST00000510548 PPM1K-005 88268322-88284590 protein_coding
  ENST00000511506 PPM1K-008 88268750-88277567 retained_intron
  ENST00000513546 PPM1K-010 88274924-88279700 retained_intron
  ENST00000514204 PPM1K-002 88275145-88284769 protein_coding
  ENST00000608933 PPM1K-001 88257620-88284736 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295908ENST00000505022ENST00000508256ENST00000513546ENST00000608933
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295908 N/A N/A 2.582±0.00 10.038±0.00 2.279±0.00 N/A 21.900±0.00 2.740±0.00 4.497±0.00 3.269±0.00 1.371±0.72 4.449±0.00 N/A N/A
ENST00000505022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.892±0.00 N/A N/A N/A
ENST00000508256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.327±0.00 N/A 6.655±0.00
ENST00000513546 N/A N/A N/A N/A N/A 0.364±0.00 N/A N/A N/A 1.159±0.00 N/A N/A N/A N/A
ENST00000608933 2.414±0.00 1.095±0.00 2.254±0.00 13.020±5.27 0.846±0.00 1.517±0.23 27.615±7.08 2.178±1.05 1.044±0.66 2.624±0.28 0.589±0.02 3.669±2.80 1.739±1.18 2.965±0.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RP CIL_0001RP_0002 CGP 4:88090264-88284769
CIL_0000KK CIL_0000KK_0001 CGP 4:88257620-88443111

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004722 IEA protein serine/threonine phosphatase activity
GO:0005739 IDA mitochondrion
GO:0006470 IEA protein dephosphorylation
GO:0008152 IEA metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010655 ppm1k protein phosphatase 1K (PP2C domain containing) protein_coding Danio_rerio
ENSMUSG00000037826 Ppm1k protein phosphatase 1K (PP2C domain containing) protein_coding Mus_musculus

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