C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000KK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163644-ENSG00000138642 CGP 9606 4:88257620-88443111
GeneTranscriptPositionBiotype
ENSG00000138642 (HERC6)
HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 		ENST00000264346 (HERC6-001) 88378863-88443111 protein_coding
ENST00000273960 (HERC6-201) 88378739-88443096 protein_coding
ENST00000380265 (HERC6-003) 88378739-88443097 protein_coding
ENST00000502870 (HERC6-006) 88379064-88390878 protein_coding
ENST00000504905 (HERC6-002) 88378911-88390732 nonsense_mediated_decay
ENST00000506714 (HERC6-004) 88378991-88399769 retained_intron
ENST00000506842 (HERC6-009) 88439845-88440640 retained_intron
ENST00000515365 (HERC6-005) 88390820-88405025 retained_intron
ENSG00000163644 (PPM1K)
protein phosphatase, Mg2+/Mn2+ dependent, 1K 		ENST00000295908 (PPM1K-009) 88261871-88284578 protein_coding
ENST00000505022 (PPM1K-007) 88278193-88283890 protein_coding
ENST00000506423 (PPM1K-003) 88268762-88284561 processed_transcript
ENST00000508256 (PPM1K-004) 88262577-88284631 protein_coding
ENST00000509340 (PPM1K-006) 88278567-88284261 protein_coding
ENST00000510548 (PPM1K-005) 88268322-88284590 protein_coding
ENST00000511506 (PPM1K-008) 88268750-88277567 retained_intron
ENST00000513546 (PPM1K-010) 88274924-88279700 retained_intron
ENST00000514204 (PPM1K-002) 88275145-88284769 protein_coding
ENST00000608933 (PPM1K-001) 88257620-88284736 protein_coding
ENSG00000246375 (RP11-10L7.1)
 ENST00000500009 (RP11-10L7.1-001) 88284942-88331421 lincRNA
CIL_0000KK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037826-ENSMUSG00000029798 CGP 10090 6:57506502-57665136
GeneTranscriptPositionBiotype
ENSMUSG00000029798 (Herc6)
hect domain and RLD 6 		ENSMUST00000031817 (Herc6-201) 57580992-57665136 protein_coding
ENSMUSG00000037826 (Ppm1k)
protein phosphatase 1K (PP2C domain containing) 		ENSMUST00000042766 (Ppm1k-001) 57506502-57535426 protein_coding
ENSMUSG00000092903 (Gm27896)
predicted gene, 27896 		ENSMUST00000175162 (Gm27896-201) 57565793-57566109 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000KK_0001ENSG00000138642ENST00000264346ENST00000273960ENST00000380265ENST00000502870ENST00000504905ENST00000506714ENST00000506842ENST00000515365ENSG00000163644ENST00000295908ENST00000505022ENST00000506423ENST00000508256ENST00000509340ENST00000510548ENST00000511506ENST00000513546ENST00000514204ENST00000608933ENSG00000246375ENST00000500009CIL_0000KK_0002ENSMUSG00000029798ENSMUST00000031817ENSMUSG00000037826ENSMUST00000042766ENSMUSG00000092903ENSMUST00000175162
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000KK_0001ENSG00000138642ENST00000264346ENST00000273960ENST00000380265ENST00000502870ENST00000515365ENSG00000163644ENST00000295908ENST00000505022ENST00000508256ENST00000513546ENST00000608933ENSG00000246375ENST00000500009CIL_0000KK_0002ENSMUSG00000029798ENSMUST00000031817ENSMUSG00000037826ENSMUST00000042766ENSMUSG00000092903ENSMUST00000175162
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138642 ENST00000264346 0.566±0.00 0.652±0.00 N/A 2.725±0.04 0.686±0.00 0.193±0.06 1.846±0.84 1.849±0.00 0.932±0.00 1.182±0.67 N/A 3.044±1.48 2.888±0.91 1.256±0.10
ENST00000273960 N/A N/A N/A 0.621±0.00 1.276±0.00 N/A N/A 0.572±0.00 0.339±0.00 N/A N/A N/A N/A 0.604±0.00
ENST00000380265 0.773±0.00 2.206±0.00 N/A 2.049±0.00 1.286±0.00 N/A N/A 0.465±0.00 0.337±0.00 0.544±0.00 0.307±0.00 N/A 0.440±0.00 1.457±0.00
ENST00000502870 N/A N/A N/A N/A N/A N/A N/A 0.743±0.00 N/A N/A N/A N/A N/A N/A
ENST00000504905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515365 N/A N/A N/A N/A N/A 1.153±0.00 N/A N/A N/A N/A 0.499±0.12 1.989±0.00 N/A N/A
ENSG00000163644 ENST00000295908 N/A N/A 2.582±0.00 10.038±0.00 2.279±0.00 N/A 21.900±0.00 2.740±0.00 4.497±0.00 3.269±0.00 1.371±0.72 4.449±0.00 N/A N/A
ENST00000505022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.892±0.00 N/A N/A N/A
ENST00000506423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.327±0.00 N/A 6.655±0.00
ENST00000509340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513546 N/A N/A N/A N/A N/A 0.364±0.00 N/A N/A N/A 1.159±0.00 N/A N/A N/A N/A
ENST00000514204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608933 2.414±0.00 1.095±0.00 2.254±0.00 13.020±5.27 0.846±0.00 1.517±0.23 27.615±7.08 2.178±1.05 1.044±0.66 2.624±0.28 0.589±0.02 3.669±2.80 1.739±1.18 2.965±0.94
ENSG00000246375 ENST00000500009 0.048±0.00 0.085±0.00 N/A 0.557±0.50 0.012±0.00 0.041±0.00 0.090±0.00 N/A 0.016±0.00 N/A N/A 0.090±0.05 0.032±0.01 0.072±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029798 ENSMUST00000031817 1.293±0.00 3.122±1.71 1.526±0.02 0.175±0.00 1.081±0.19 0.634±0.27 0.317±0.02 0.633±0.21 1.990±0.88 1.892±0.53 0.174±0.07 1.945±0.78 0.387±0.11 0.795±0.27
ENSMUSG00000037826 ENSMUST00000042766 1.342±0.23 2.712±0.45 2.629±0.34 3.567±3.06 1.974±0.22 0.923±0.34 13.122±0.68 2.588±1.02 8.150±4.95 1.517±0.26 2.185±0.22 2.437±0.69 0.608±0.10 0.479±0.06
ENSMUSG00000092903 ENSMUST00000175162 0.445±0.11 N/A 0.219±0.01 1.516±0.63 0.660±0.09 N/A 0.361±0.21 0.412±0.18 0.548±0.56 0.535±0.11 0.260±0.09 2.567±1.92 0.792±0.57 0.530±0.25

Loading