C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: deoxyribonuclease I-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163687 DNASE1L3 9606 - 3:58192257-58214697 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000394549 DNASE1L3-001 58192628-58211223 protein_coding
  ENST00000460422 DNASE1L3-003 58205490-58214671 protein_coding
  ENST00000461914 DNASE1L3-007 58201070-58211224 protein_coding
  ENST00000463694 DNASE1L3-004 58207760-58210920 retained_intron
  ENST00000477209 DNASE1L3-006 58192628-58204823 protein_coding
  ENST00000483681 DNASE1L3-002 58192627-58214697 protein_coding
  ENST00000486455 DNASE1L3-005 58192257-58210969 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000394549ENST00000461914ENST00000463694ENST00000477209ENST00000483681ENST00000486455
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000394549 0.600±0.00 N/A 3.335±0.00 N/A 0.849±0.00 1.278±0.51 0.856±0.00 N/A 0.474±0.00 1.660±0.00 N/A 0.912±0.67 2.855±0.72 1.151±0.87
ENST00000461914 1.248±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.435±0.00 0.766±0.00 5.461±0.00 1.064±0.50
ENST00000463694 N/A N/A N/A N/A N/A N/A N/A N/A 1.121±0.00 N/A N/A N/A N/A N/A
ENST00000477209 1.880±0.00 21.137±0.00 N/A 0.932±0.00 10.724±0.00 0.923±0.00 N/A N/A 41.162±0.00 2.940±1.59 N/A 1.351±0.01 5.168±1.01 1.650±1.15
ENST00000483681 N/A N/A N/A N/A N/A N/A 0.085±0.00 N/A 0.151±0.00 0.290±0.00 0.026±0.00 0.116±0.00 N/A 0.082±0.00
ENST00000486455 N/A N/A N/A N/A 3.139±0.00 0.484±0.00 N/A 8.124±6.11 N/A N/A N/A 0.234±0.00 1.350±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UM CIL_0002UM_0001 CGP 3:58008400-58214697
CIL_0002UJ CIL_0002UJ_0001 CGP 3:58192257-58295693

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0003677 IEA DNA binding
GO:0004519 IEA endonuclease activity
GO:0004520 IEA endodeoxyribonuclease activity
GO:0004536 TAS:IEA deoxyribonuclease activity
GO:0005509 TAS calcium ion binding
GO:0005634 IEA nucleus
GO:0006259 TAS DNA metabolic process
GO:0006308 IEA DNA catabolic process
GO:0006309 IEA apoptotic DNA fragmentation
GO:0010623 IEA developmental programmed cell death
GO:0016888 IEA endodeoxyribonuclease activity, producing 5'-phosphomonoesters

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000025279 Dnase1l3 deoxyribonuclease 1-like 3 protein_coding Mus_musculus

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