C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: deoxyribonuclease I-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394549 DNASE1L3-001 ENSG00000163687 9606 - 3:58192628-58211223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartLiverLungOvaryPlacentaTestisENST00000394549
Transcript ID Adipose Bladder Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000394549 0.600±0.00 3.335±0.00 0.849±0.00 1.278±0.51 0.856±0.00 0.474±0.00 1.660±0.00 0.912±0.67 2.855±0.72 1.151±0.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UM CIL_0002UM_0001 CGP 3:58008400-58214697
CIL_0002UJ CIL_0002UJ_0001 CGP 3:58192257-58295693

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004519 IEA endonuclease activity
GO:0004520 IEA endodeoxyribonuclease activity
GO:0004536 TAS:IEA deoxyribonuclease activity
GO:0005509 TAS calcium ion binding
GO:0005634 IEA nucleus
GO:0006259 TAS DNA metabolic process
GO:0006308 IEA DNA catabolic process
GO:0006309 IEA apoptotic DNA fragmentation
GO:0010623 IEA developmental programmed cell death
GO:0016888 IEA endodeoxyribonuclease activity, producing 5'-phosphomonoesters

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026315 Dnase1l3-001 protein_coding Mus_musculus 0 898

Loading