C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cysteine-rich with EGF-like domains 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163703 CRELD1 9606 + 3:9933822-9945413 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326434 CRELD1-004 9933856-9945032 protein_coding
  ENST00000383811 CRELD1-001 9933840-9945413 protein_coding
  ENST00000397170 CRELD1-002 9933822-9944994 protein_coding
  ENST00000414117 CRELD1-008 9934419-9943175 nonsense_mediated_decay
  ENST00000435417 CRELD1-013 9942793-9945014 protein_coding
  ENST00000452070 CRELD1-003 9933845-9944999 protein_coding
  ENST00000465716 CRELD1-009 9934483-9938579 retained_intron
  ENST00000467713 CRELD1-011 9941155-9943480 retained_intron
  ENST00000482691 CRELD1-012 9942813-9944531 retained_intron
  ENST00000489674 CRELD1-010 9941124-9944423 processed_transcript
  ENST00000491527 CRELD1-007 9934505-9935086 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326434ENST00000383811ENST00000397170ENST00000435417ENST00000452070ENST00000467713
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326434 N/A N/A 0.664±0.00 N/A N/A 6.073±0.00 N/A 4.007±0.00 2.996±0.99 1.385±0.00 N/A 1.844±0.00 N/A 7.458±4.91
ENST00000383811 1.084±0.00 1.979±0.00 1.283±0.00 6.447±1.03 2.150±1.16 2.634±0.00 1.079±0.54 3.295±0.00 1.756±0.07 1.180±0.00 1.557±0.63 3.940±2.40 3.014±0.17 1.552±0.00
ENST00000397170 N/A N/A N/A N/A 2.181±0.00 1.292±0.00 1.581±0.97 3.011±1.27 N/A 4.424±0.00 1.010±0.00 16.233±0.00 11.265±6.61 N/A
ENST00000435417 N/A 3.768±0.00 1.973±0.00 N/A N/A N/A N/A 9.382±0.00 5.204±0.00 4.829±0.00 N/A N/A N/A N/A
ENST00000452070 7.725±0.00 7.159±0.00 N/A 7.591±5.61 12.425±0.00 11.107±0.00 8.216±6.26 8.047±0.00 5.737±4.76 3.405±2.71 13.655±0.00 12.437±1.62 8.853±0.94 5.979±0.00
ENST00000467713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.366±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000599 CIL_000599_0001 CGP 3:9917074-9945413
CIL_00059A CIL_00059A_0001 CGP 3:9933822-9952394

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003197 TAS endocardial cushion development
GO:0003279 TAS cardiac septum development
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006990 CABZ01112331.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000074886 CRELD2 (2 of 2) cysteine-rich with EGF-like domains 1 protein_coding Danio_rerio
ENSMUSG00000030284 Creld1 cysteine-rich with EGF-like domains 1 protein_coding Mus_musculus

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