C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00059A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163703-ENSG00000163704 CGP 9606 3:9933822-9952394
GeneTranscriptPositionBiotype
ENSG00000163703 (CRELD1)
cysteine-rich with EGF-like domains 1 		ENST00000326434 (CRELD1-004) 9933856-9945032 protein_coding
ENST00000383811 (CRELD1-001) 9933840-9945413 protein_coding
ENST00000397170 (CRELD1-002) 9933822-9944994 protein_coding
ENST00000414117 (CRELD1-008) 9934419-9943175 nonsense_mediated_decay
ENST00000435417 (CRELD1-013) 9942793-9945014 protein_coding
ENST00000452070 (CRELD1-003) 9933845-9944999 protein_coding
ENST00000465716 (CRELD1-009) 9934483-9938579 retained_intron
ENST00000467713 (CRELD1-011) 9941155-9943480 retained_intron
ENST00000482691 (CRELD1-012) 9942813-9944531 retained_intron
ENST00000489674 (CRELD1-010) 9941124-9944423 processed_transcript
ENST00000491527 (CRELD1-007) 9934505-9935086 retained_intron
ENSG00000163704 (PRRT3)
proline-rich transmembrane protein 3 		ENST00000295984 (PRRT3-003) 9945542-9952374 nonsense_mediated_decay
ENST00000411976 (PRRT3-004) 9948580-9952390 protein_coding
ENST00000412055 (PRRT3-001) 9945542-9952394 protein_coding
ENSG00000230082 (PRRT3-AS1)
PRRT3 antisense RNA 1 		ENST00000431558 (PRRT3-AS1-001) 9947404-9954787 antisense
ENSG00000269894 (RP11-1020A11.1)
 ENST00000602411 (RP11-1020A11.1-001) 9935706-9936258 sense_intronic
CIL_00059A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030284-ENSMUSG00000045009 CGP 10090 6:113483297-113501818
GeneTranscriptPositionBiotype
ENSMUSG00000030284 (Creld1)
cysteine-rich with EGF-like domains 1 		ENSMUST00000032422 (Creld1-001) 113483297-113493338 protein_coding
ENSMUST00000129125 (Creld1-005) 113492019-113493335 retained_intron
ENSMUST00000135852 (Creld1-004) 113487494-113489725 retained_intron
ENSMUST00000147932 (Creld1-002) 113483423-113489239 retained_intron
ENSMUST00000156764 (Creld1-003) 113483855-113488408 retained_intron
ENSMUSG00000045009 (Prrt3)
proline-rich transmembrane protein 3 		ENSMUST00000101059 (Prrt3-201) 113494095-113501818 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00059A_0001ENSG00000163703ENST00000326434ENST00000383811ENST00000397170ENST00000414117ENST00000435417ENST00000452070ENST00000465716ENST00000467713ENST00000482691ENST00000489674ENST00000491527ENSG00000163704ENST00000295984ENST00000411976ENST00000412055ENSG00000230082ENST00000431558ENSG00000269894ENST00000602411CIL_00059A_0002ENSMUSG00000030284ENSMUST00000032422ENSMUST00000129125ENSMUST00000135852ENSMUST00000147932ENSMUST00000156764ENSMUSG00000045009ENSMUST00000101059
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00059A_0001ENSG00000163703ENST00000326434ENST00000383811ENST00000397170ENST00000435417ENST00000452070ENST00000467713ENSG00000163704ENST00000295984ENST00000411976ENST00000412055ENSG00000230082ENST00000431558ENSG00000269894ENST00000602411CIL_00059A_0002ENSMUSG00000030284ENSMUST00000032422ENSMUST00000129125ENSMUST00000147932ENSMUSG00000045009ENSMUST00000101059
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163703 ENST00000326434 N/A N/A 0.664±0.00 N/A N/A 6.073±0.00 N/A 4.007±0.00 2.996±0.99 1.385±0.00 N/A 1.844±0.00 N/A 7.458±4.91
ENST00000383811 1.084±0.00 1.979±0.00 1.283±0.00 6.447±1.03 2.150±1.16 2.634±0.00 1.079±0.54 3.295±0.00 1.756±0.07 1.180±0.00 1.557±0.63 3.940±2.40 3.014±0.17 1.552±0.00
ENST00000397170 N/A N/A N/A N/A 2.181±0.00 1.292±0.00 1.581±0.97 3.011±1.27 N/A 4.424±0.00 1.010±0.00 16.233±0.00 11.265±6.61 N/A
ENST00000414117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435417 N/A 3.768±0.00 1.973±0.00 N/A N/A N/A N/A 9.382±0.00 5.204±0.00 4.829±0.00 N/A N/A N/A N/A
ENST00000452070 7.725±0.00 7.159±0.00 N/A 7.591±5.61 12.425±0.00 11.107±0.00 8.216±6.26 8.047±0.00 5.737±4.76 3.405±2.71 13.655±0.00 12.437±1.62 8.853±0.94 5.979±0.00
ENST00000465716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.366±0.00
ENST00000482691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163704 ENST00000295984 N/A N/A 0.457±0.00 N/A N/A N/A N/A N/A 0.917±0.00 0.095±0.00 0.061±0.00 0.753±0.54 0.201±0.06 0.587±0.30
ENST00000411976 N/A N/A N/A 1.085±0.00 N/A 0.228±0.00 0.216±0.00 0.249±0.00 0.411±0.00 0.028±0.00 0.095±0.00 N/A N/A N/A
ENST00000412055 0.721±0.00 1.419±0.00 0.075±0.00 4.140±2.97 1.227±0.00 0.467±0.00 0.333±0.00 0.917±0.00 0.232±0.00 0.722±0.69 0.817±0.00 1.006±1.05 0.491±0.14 1.382±0.07
ENSG00000230082 ENST00000431558 2.294±0.00 1.203±0.00 N/A N/A 5.291±0.00 0.888±0.46 0.360±0.07 0.909±0.02 0.759±0.00 0.552±0.00 9.991±8.80 0.773±0.27 1.074±0.10 1.046±0.00
ENSG00000269894 ENST00000602411 0.021±0.00 0.869±0.00 N/A 0.524±0.38 0.114±0.01 0.502±0.46 0.062±0.00 0.836±0.00 0.038±0.00 0.094±0.00 N/A 0.711±0.18 0.138±0.04 0.236±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030284 ENSMUST00000032422 17.507±5.95 11.339±0.80 19.396±1.07 17.537±10.58 13.163±2.25 4.611±0.75 11.140±0.71 8.125±0.59 6.411±3.41 12.081±0.77 17.970±1.03 8.604±2.86 8.976±3.76 1.501±0.46
ENSMUST00000129125 N/A N/A N/A N/A N/A 3.266±1.28 N/A N/A N/A N/A N/A 5.717±0.00 N/A 0.607±0.15
ENSMUST00000135852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147932 N/A N/A N/A 2.090±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.353±0.00
ENSMUST00000156764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000045009 ENSMUST00000101059 0.100±0.03 0.163±0.06 0.508±0.10 1.996±1.29 0.143±0.15 0.137±0.06 0.031±0.01 0.052±0.02 0.034±0.02 0.232±0.13 0.067±0.01 0.142±0.07 0.235±0.17 0.058±0.03

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