C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bassoon presynaptic cytomatrix protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164061 BSN 9606 + 3:49554489-49671545 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296452 BSN-001 49554489-49671545 protein_coding
  ENST00000467456 BSN-002 49643029-49651349 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296452ENST00000467456
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296452 0.052±0.00 0.142±0.00 10.578±5.90 0.098±0.01 0.165±0.05 0.057±0.03 0.216±0.00 0.077±0.01 0.036±0.02 0.059±0.06 0.125±0.07 0.081±0.03 1.280±0.05
ENST00000467456 N/A N/A N/A N/A N/A N/A N/A 0.326±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MJ CIL_0001MJ_0002 CGP 3:49554489-49683963

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 TAS nucleus
GO:0007268 TAS synaptic transmission
GO:0014069 IEA postsynaptic density
GO:0030054 IEA cell junction
GO:0030424 IEA axon
GO:0030425 ISS dendrite
GO:0044306 IEA neuron projection terminus
GO:0045202 IEA synapse
GO:0046872 IEA metal ion binding
GO:0048786 ISS presynaptic active zone
GO:0048788 TAS presynaptic cytoskeletal matrix assembled at active zones
GO:0060076 ISS excitatory synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079161 BSN (1 of 3) bassoon presynaptic cytomatrix protein protein_coding Danio_rerio
ENSDARG00000079822 BSN (2 of 3) bassoon presynaptic cytomatrix protein protein_coding Danio_rerio
ENSDARG00000086319 BSN (3 of 3) bassoon presynaptic cytomatrix protein protein_coding Danio_rerio
ENSMUSG00000032589 Bsn bassoon protein_coding Mus_musculus

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