C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAD54-like 2 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164080 RAD54L2 9606 + 3:51541144-51668667 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000409535 RAD54L2-001 51541580-51668667 protein_coding
  ENST00000432863 RAD54L2-005 51629391-51663457 protein_coding
  ENST00000461680 RAD54L2-002 51630322-51663594 retained_intron
  ENST00000462377 RAD54L2-004 51629393-51630931 retained_intron
  ENST00000487093 RAD54L2-003 51541580-51663594 retained_intron
  ENST00000602430 RAD54L2-006 51541144-51541870 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409535ENST00000432863ENST00000461680ENST00000487093
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409535 4.057±0.00 5.525±0.00 0.718±0.00 2.094±1.54 2.277±1.26 1.640±1.09 1.883±0.00 2.463±0.69 1.685±0.10 2.025±0.58 1.580±0.93 3.354±1.47 2.950±0.93 4.519±0.33
ENST00000432863 N/A N/A 1.251±0.00 0.940±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461680 N/A N/A 0.897±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487093 N/A N/A N/A 0.954±0.00 1.669±0.00 N/A 0.615±0.00 1.856±0.00 2.017±0.00 N/A 1.086±0.00 2.271±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003712 IEA transcription cofactor activity
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity
GO:0019901 IEA protein kinase binding
GO:2001141 IEA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063031 rad54l2 RAD54-like 2 (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000040661 Rad54l2 RAD54 like 2 (S. cerevisiae) protein_coding Mus_musculus

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