C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAD54 like 2 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040661 Rad54l2 10090 - 9:106688082-106789194 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046502 Rad54l2-001 106688082-106789194 protein_coding
  ENSMUST00000189553 Rad54l2-004 106688790-106693305 protein_coding
  ENSMUST00000190363 Rad54l2-002 106721906-106722871 protein_coding
  ENSMUST00000191300 Rad54l2-003 106786759-106789176 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046502ENSMUST00000189553
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046502 3.621±1.15 5.535±1.62 2.429±0.33 4.122±1.11 2.517±0.69 3.151±0.53 1.550±0.40 3.030±0.25 2.308±0.71 4.038±0.22 1.446±0.18 5.044±0.97 2.807±1.52 3.011±0.88
ENSMUST00000189553 N/A 11.328±3.00 N/A N/A 7.254±1.33 7.649±0.89 3.359±0.00 4.572±0.00 5.542±1.01 6.266±0.10 N/A 12.306±2.30 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003712 IDA transcription cofactor activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0019901 IPI protein kinase binding
GO:2001141 IDA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063031 rad54l2 RAD54-like 2 (S. cerevisiae) protein_coding Danio_rerio
ENSG00000164080 RAD54L2 RAD54-like 2 (S. cerevisiae) protein_coding Homo_sapiens

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