C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein arginine methyltransferase 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164169 PRMT9 9606 - 4:147637785-147684230 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000322396 PRMT9-001 147637785-147684230 protein_coding
  ENST00000510269 PRMT9-003 147638385-147661318 retained_intron
  ENST00000511687 PRMT9-004 147638681-147639293 retained_intron
  ENST00000514886 PRMT9-002 147638385-147684125 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000322396ENST00000510269ENST00000514886
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000322396 0.506±0.00 N/A 1.262±0.01 0.717±0.00 0.269±0.06 0.446±0.00 0.529±0.00 2.027±0.00 0.658±0.00 0.318±0.00 0.636±0.07 N/A
ENST00000510269 0.299±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514886 1.261±0.00 0.367±0.00 1.933±0.00 1.742±0.61 1.014±0.00 1.025±0.00 2.519±2.19 0.958±0.66 0.445±0.02 3.243±1.09 0.806±0.27 8.801±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XF CIL_0008XF_0001 VISTA 4:147181569-147782559
CIL_0008OE CIL_0008OE_0001 VISTA 4:147195167-147795934
CIL_0008H5 CIL_0008H5_0001 VISTA 4:147235170-147835800
CIL_00064D CIL_00064D_0002 CGP 4:147480917-147672044
CIL_00064C CIL_00064C_0002 CGP 4:147617383-147684230
CIL_0001PD CIL_0001PD_0002 CGP 4:147637785-148072780

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0006479 IEA protein methylation
GO:0008168 IEA methyltransferase activity
GO:0008276 IEA protein methyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036755 prmt10 protein arginine methyltransferase 10 (putative) protein_coding Danio_rerio
ENSMUSG00000037134 Prmt10 protein arginine methyltransferase 10 (putative) protein_coding Mus_musculus

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