C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008OE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm760 VISTA 9606 4:147195167-147795934
GeneTranscriptPositionBiotype
ENSG00000071205 (ARHGAP10)
Rho GTPase activating protein 10 		ENST00000336498 (ARHGAP10-001) 147732063-148072780 protein_coding
ENST00000506020 (ARHGAP10-005) 147946239-148072776 retained_intron
ENST00000506054 (ARHGAP10-003) 147860983-148072776 retained_intron
ENST00000507661 (ARHGAP10-004) 147881867-148072775 protein_coding
ENST00000510076 (ARHGAP10-007) 148065240-148072376 processed_transcript
ENST00000510379 (ARHGAP10-002) 147732063-147858488 retained_intron
ENST00000513548 (ARHGAP10-006) 148023054-148063277 retained_intron
ENSG00000151617 (EDNRA)
endothelin receptor type A 		ENST00000324300 (EDNRA-001) 147480932-147544954 protein_coding
ENST00000358556 (EDNRA-201) 147480917-147544954 protein_coding
ENST00000503721 (EDNRA-006) 147531643-147543980 processed_transcript
ENST00000506066 (EDNRA-004) 147485682-147542693 protein_coding
ENST00000510697 (EDNRA-003) 147485682-147542693 nonsense_mediated_decay
ENST00000511804 (EDNRA-002) 147480932-147542878 protein_coding
ENST00000514245 (EDNRA-005) 147485834-147532659 processed_transcript
ENSG00000164168 (TMEM184C)
transmembrane protein 184C 		ENST00000296582 (TMEM184C-001) 147617383-147636721 protein_coding
ENST00000505999 (TMEM184C-003) 147629612-147634528 nonsense_mediated_decay
ENST00000506826 (TMEM184C-002) 147632547-147634178 retained_intron
ENST00000508208 (TMEM184C-004) 147617386-147672044 protein_coding
ENSG00000164169 (PRMT9)
protein arginine methyltransferase 9 		ENST00000322396 (PRMT9-001) 147637785-147684230 protein_coding
ENST00000510269 (PRMT9-003) 147638385-147661318 retained_intron
ENST00000511687 (PRMT9-004) 147638681-147639293 retained_intron
ENST00000514886 (PRMT9-002) 147638385-147684125 nonsense_mediated_decay
ENSG00000221369 (MIR548G)
microRNA 548g 		ENST00000408442 (MIR548G-201) 147344629-147344717 miRNA
ENSG00000241281 (RP11-364M6.1)
 ENST00000473673 (RP11-364M6.1-001) 147425974-147426351 processed_pseudogene
ENSG00000249004 (PRMT5P1)
protein arginine methyltransferase 5 pseudogene 1 		ENST00000514351 (PRMT5P1-001) 147458724-147459321 processed_pseudogene
ENSG00000251254 (GTF2F2P1)
general transcription factor IIF, polypeptide 2 pseudogene 1 		ENST00000511083 (GTF2F2P1-001) 147506091-147506765 processed_pseudogene
ENSG00000251298 (RP11-425A23.1)
 ENST00000508072 (RP11-425A23.1-001) 147609552-147617245 antisense
ENSG00000251688 (RP11-752L20.5)
 ENST00000509370 (RP11-752L20.5-001) 147567606-147594587 lincRNA
ENSG00000252951 (RNA5SP165)
RNA, 5S ribosomal pseudogene 165 		ENST00000517142 (RNA5SP165-201) 147745303-147745417 rRNA
ENSG00000280219 (RP11-752L20.3)
 ENST00000623125 (RP11-752L20.3-001) 147487971-147496062 TEC
CIL_0008OE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm760 VISTA 10090 8:77407194-78008233
GeneTranscriptPositionBiotype
ENSMUSG00000031616 (Ednra)
endothelin receptor type A 		ENSMUST00000034029 (Ednra-001) 77663031-77724436 protein_coding
ENSMUST00000146561 (Ednra-002) 77669694-77724464 retained_intron
ENSMUSG00000031617 (Tmem184c)
transmembrane protein 184C 		ENSMUST00000034030 (Tmem184c-001) 77595982-77610653 protein_coding
ENSMUST00000141202 (Tmem184c-003) 77606363-77610668 protein_coding
ENSMUST00000152168 (Tmem184c-002) 77602866-77610698 protein_coding
ENSMUSG00000037134 (Prmt10)
protein arginine methyltransferase 10 (putative) 		ENSMUST00000056237 (Prmt10-201) 77549397-77581338 protein_coding
ENSMUST00000118622 (Prmt10-001) 77549410-77581338 protein_coding
ENSMUST00000142824 (Prmt10-002) 77549407-77563978 retained_intron
ENSMUST00000156753 (Prmt10-003) 77563662-77565093 retained_intron
ENSMUSG00000037148 (Arhgap10)
Rho GTPase activating protein 10 		ENSMUST00000076316 (Arhgap10-201) 77250366-77517907 protein_coding
ENSMUSG00000086781 (1700092C02Rik)
RIKEN cDNA 1700092C02 gene 		ENSMUST00000134397 (1700092C02Rik-001) 77624172-77628957 lincRNA
ENSMUSG00000087750 (Gm23468)
predicted gene, 23468 		ENSMUST00000157125 (Gm23468-201) 77569495-77569602 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008OE_0001ENSG00000071205ENST00000336498ENST00000506020ENST00000506054ENST00000507661ENST00000510076ENST00000510379ENST00000513548ENSG00000151617ENST00000324300ENST00000358556ENST00000503721ENST00000506066ENST00000510697ENST00000511804ENST00000514245ENSG00000164168ENST00000296582ENST00000505999ENST00000506826ENST00000508208ENSG00000164169ENST00000322396ENST00000510269ENST00000511687ENST00000514886ENSG00000221369ENST00000408442ENSG00000241281ENST00000473673ENSG00000249004ENST00000514351ENSG00000251254ENST00000511083ENSG00000251298ENST00000508072ENSG00000251688ENST00000509370ENSG00000252951ENST00000517142ENSG00000280219ENST00000623125CIL_0008OE_0002ENSMUSG00000031616ENSMUST00000034029ENSMUST00000146561ENSMUSG00000031617ENSMUST00000034030ENSMUST00000141202ENSMUST00000152168ENSMUSG00000037134ENSMUST00000056237ENSMUST00000118622ENSMUST00000142824ENSMUST00000156753ENSMUSG00000037148ENSMUST00000076316ENSMUSG00000086781ENSMUST00000134397ENSMUSG00000087750ENSMUST00000157125
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008OE_0001ENSG00000071205ENST00000336498ENST00000506054ENST00000507661ENSG00000151617ENST00000324300ENST00000358556ENST00000503721ENST00000506066ENST00000510697ENST00000511804ENSG00000164168ENST00000296582ENST00000505999ENST00000508208ENSG00000164169ENST00000322396ENST00000510269ENST00000514886ENSG00000221369ENST00000408442ENSG00000241281ENST00000473673ENSG00000249004ENST00000514351ENSG00000251254ENST00000511083ENSG00000251298ENST00000508072ENSG00000251688ENST00000509370ENSG00000252951ENST00000517142ENSG00000280219ENST00000623125CIL_0008OE_0002ENSMUSG00000031616ENSMUST00000034029ENSMUST00000146561ENSMUSG00000031617ENSMUST00000034030ENSMUST00000141202ENSMUSG00000037134ENSMUST00000056237ENSMUST00000118622ENSMUST00000142824ENSMUSG00000037148ENSMUST00000076316ENSMUSG00000086781ENSMUST00000134397ENSMUSG00000087750ENSMUST00000157125
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071205 ENST00000336498 8.191±0.00 4.524±0.00 0.510±0.00 3.250±2.30 6.210±3.90 12.432±0.00 9.231±1.67 2.589±0.00 14.357±13.47 3.393±0.00 7.643±4.44 6.618±1.71 7.168±3.73 10.094±4.18
ENST00000506020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506054 N/A N/A 0.269±0.00 0.079±0.00 0.573±0.00 0.896±0.00 0.868±0.00 0.113±0.00 3.852±0.00 N/A N/A N/A N/A N/A
ENST00000507661 2.629±0.00 3.572±0.00 N/A 0.396±0.00 5.433±0.00 8.075±0.00 2.928±0.00 3.055±0.00 N/A 2.310±0.00 5.913±0.00 4.553±2.56 3.263±0.84 3.982±0.52
ENST00000510076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151617 ENST00000324300 3.258±0.00 5.210±0.00 0.165±0.00 0.213±0.00 2.678±2.06 2.448±0.00 2.463±0.00 1.222±0.00 1.500±1.41 4.483±3.23 0.820±0.00 8.342±3.27 2.614±1.33 5.047±3.07
ENST00000358556 N/A 1.031±0.00 N/A 0.165±0.00 N/A 0.246±0.00 N/A 0.277±0.00 N/A N/A N/A N/A N/A N/A
ENST00000503721 N/A N/A N/A 0.720±0.00 0.932±0.00 N/A 0.565±0.00 N/A 2.235±0.00 2.419±0.00 0.349±0.00 1.207±0.00 N/A N/A
ENST00000506066 N/A N/A N/A N/A 1.276±0.00 0.523±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510697 N/A N/A 0.747±0.00 N/A N/A N/A N/A N/A N/A 4.317±0.00 N/A N/A N/A N/A
ENST00000511804 N/A N/A N/A 0.407±0.00 N/A N/A 0.654±0.00 N/A 3.029±0.00 N/A 1.431±0.00 N/A N/A N/A
ENST00000514245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164168 ENST00000296582 2.761±0.00 0.742±0.00 1.054±0.00 1.001±0.00 1.064±0.54 3.007±0.00 0.647±0.00 N/A 3.958±0.00 N/A 0.602±0.13 4.126±1.56 2.697±1.61 2.793±0.00
ENST00000505999 2.918±0.00 3.649±0.00 5.157±0.00 N/A N/A 4.193±0.90 N/A N/A N/A N/A 2.827±0.24 N/A 5.592±2.34 5.349±0.00
ENST00000506826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508208 2.312±0.00 N/A N/A N/A N/A 6.769±0.00 2.897±0.55 7.354±0.00 7.629±0.00 3.001±0.00 1.480±0.70 N/A 2.491±0.03 N/A
ENSG00000164169 ENST00000322396 N/A 0.506±0.00 N/A 1.262±0.01 0.717±0.00 0.269±0.06 0.446±0.00 0.529±0.00 N/A 2.027±0.00 0.658±0.00 0.318±0.00 0.636±0.07 N/A
ENST00000510269 N/A 0.299±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514886 N/A 1.261±0.00 0.367±0.00 1.933±0.00 1.742±0.61 1.014±0.00 1.025±0.00 2.519±2.19 N/A 0.958±0.66 0.445±0.02 3.243±1.09 0.806±0.27 8.801±0.12
ENSG00000221369 ENST00000408442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.419±0.00
ENSG00000241281 ENST00000473673 0.037±0.00 0.038±0.00 N/A 0.040±0.00 0.076±0.00 0.175±0.00 0.035±0.00 N/A 0.068±0.00 0.139±0.00 0.567±0.00 N/A N/A 0.104±0.00
ENSG00000249004 ENST00000514351 N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251254 ENST00000511083 N/A 0.095±0.00 0.340±0.00 0.046±0.00 0.045±0.00 0.186±0.00 0.094±0.08 N/A 0.811±0.00 0.412±0.37 N/A 0.402±0.41 0.025±0.00 0.084±0.01
ENSG00000251298 ENST00000508072 0.152±0.00 0.450±0.00 N/A 0.266±0.05 0.248±0.00 0.046±0.00 0.073±0.00 0.349±0.00 0.022±0.00 0.044±0.00 0.156±0.00 0.128±0.05 0.075±0.00 0.570±0.17
ENSG00000251688 ENST00000509370 N/A 0.083±0.00 N/A 0.018±0.00 0.120±0.00 0.016±0.00 N/A 0.083±0.00 0.028±0.00 N/A N/A 0.020±0.00 N/A 0.151±0.00
ENSG00000252951 ENST00000517142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.438±0.00 N/A 0.812±0.00
ENSG00000280219 ENST00000623125 0.066±0.00 0.142±0.00 0.153±0.00 0.062±0.05 0.257±0.10 0.101±0.04 0.243±0.15 0.058±0.01 0.295±0.29 0.611±0.30 0.038±0.02 0.401±0.24 0.178±0.01 0.220±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031616 ENSMUST00000034029 21.200±13.64 5.591±0.33 3.208±0.53 2.762±1.68 11.415±1.33 4.644±0.59 14.112±0.93 2.212±0.38 1.893±0.90 28.339±3.16 0.672±0.09 13.712±2.29 1.339±0.56 0.921±0.31
ENSMUST00000146561 N/A 0.839±0.10 N/A N/A 1.461±0.00 0.918±0.14 N/A N/A N/A 4.243±0.34 0.109±0.00 12.348±4.25 N/A 1.022±0.04
ENSMUSG00000031617 ENSMUST00000034030 9.255±0.72 16.155±0.94 5.253±0.19 9.058±4.34 7.935±3.79 2.454±0.73 2.784±0.93 6.971±1.28 2.984±1.06 6.592±0.27 2.220±0.90 12.691±5.92 2.834±1.48 4.294±0.94
ENSMUST00000141202 N/A N/A N/A N/A 21.828±0.00 2.224±0.44 N/A N/A N/A N/A N/A 26.148±4.17 N/A N/A
ENSMUST00000152168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037134 ENSMUST00000056237 5.401±3.06 4.246±0.00 4.711±0.48 5.715±1.77 4.382±0.44 2.946±0.00 2.774±0.27 3.695±0.69 4.029±0.49 4.188±1.30 2.793±0.48 6.232±1.98 6.107±1.55 1.827±0.11
ENSMUST00000118622 5.050±1.54 9.203±5.05 N/A 0.704±0.00 4.869±2.64 3.647±1.20 2.280±0.00 2.651±1.87 4.269±0.24 4.310±2.09 N/A 8.244±2.36 0.916±0.00 1.742±0.46
ENSMUST00000142824 N/A 1.152±0.00 N/A 1.213±0.12 0.619±0.00 0.407±0.08 0.231±0.04 0.421±0.00 0.340±0.00 0.740±0.04 N/A 1.366±0.50 N/A 0.143±0.05
ENSMUST00000156753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037148 ENSMUST00000076316 7.315±3.36 11.014±1.63 16.445±2.14 1.801±0.54 5.568±1.49 3.135±1.75 6.654±0.96 10.274±4.21 1.649±1.50 5.821±0.44 10.959±2.29 18.088±4.36 48.855±25.02 2.528±0.77
ENSMUSG00000086781 ENSMUST00000134397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.540±0.33
ENSMUSG00000087750 ENSMUST00000157125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.198±21.29 78.256±0.00 N/A

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