C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 161B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164180 TMEM161B 9606 - 5:88189633-88269476 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296595 TMEM161B-001 88195206-88268848 protein_coding
  ENST00000503194 TMEM161B-011 88228459-88269476 processed_transcript
  ENST00000503755 TMEM161B-013 88206420-88268829 processed_transcript
  ENST00000503943 TMEM161B-015 88228441-88251037 processed_transcript
  ENST00000506536 TMEM161B-008 88195207-88268822 protein_coding
  ENST00000507872 TMEM161B-009 88202684-88268819 nonsense_mediated_decay
  ENST00000509387 TMEM161B-003 88202943-88268857 protein_coding
  ENST00000510089 TMEM161B-004 88195169-88268848 nonsense_mediated_decay
  ENST00000511087 TMEM161B-005 88195047-88268799 nonsense_mediated_decay
  ENST00000511218 TMEM161B-010 88195828-88220631 protein_coding
  ENST00000512429 TMEM161B-007 88196117-88268829 protein_coding
  ENST00000513487 TMEM161B-012 88207035-88268848 processed_transcript
  ENST00000514135 TMEM161B-006 88189633-88268830 protein_coding
  ENST00000515293 TMEM161B-016 88196350-88198451 processed_transcript
  ENST00000515477 TMEM161B-014 88220615-88268847 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296595ENST00000506536ENST00000510089ENST00000511087ENST00000511218ENST00000514135ENST00000515477
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296595 0.498±0.00 N/A 4.018±0.00 1.037±0.00 1.040±0.00 1.730±0.00 1.164±0.00 1.148±0.00 0.724±0.00 1.067±0.00 2.675±0.78 1.405±0.36 3.513±0.48
ENST00000506536 0.765±0.00 1.190±0.00 3.069±0.00 N/A N/A N/A 2.479±0.00 N/A N/A N/A 0.893±0.00 N/A N/A
ENST00000510089 0.150±0.00 0.380±0.00 0.825±0.04 0.306±0.00 0.185±0.00 0.349±0.00 0.851±0.00 0.341±0.20 0.143±0.00 N/A 0.479±0.13 0.133±0.00 1.020±0.00
ENST00000511087 N/A 0.772±0.00 N/A N/A N/A N/A N/A 0.444±0.00 0.419±0.00 N/A N/A N/A N/A
ENST00000511218 N/A N/A N/A N/A 1.264±0.00 N/A N/A N/A N/A 1.367±0.00 2.418±0.00 1.888±0.00 8.084±0.00
ENST00000514135 N/A 1.356±0.00 N/A N/A N/A N/A N/A 2.148±0.00 N/A N/A N/A N/A N/A
ENST00000515477 N/A N/A N/A N/A N/A N/A 3.905±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091F CIL_00091F_0001 VISTA 5:87644125-88245828
CIL_0008S7 CIL_0008S7_0001 VISTA 5:88096337-88697448
CIL_0005KE CIL_0005KE_0002 CGP 5:88189633-88904105

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0015074 IEA DNA integration
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055989 tmem161b transmembrane protein 161B protein_coding Danio_rerio
ENSMUSG00000035762 Tmem161b transmembrane protein 161B protein_coding Mus_musculus

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