C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008S7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs268 VISTA 9606 5:88096337-88697448
GeneTranscriptPositionBiotype
ENSG00000164180 (TMEM161B)
transmembrane protein 161B 		ENST00000296595 (TMEM161B-001) 88195206-88268848 protein_coding
ENST00000503194 (TMEM161B-011) 88228459-88269476 processed_transcript
ENST00000503755 (TMEM161B-013) 88206420-88268829 processed_transcript
ENST00000503943 (TMEM161B-015) 88228441-88251037 processed_transcript
ENST00000506536 (TMEM161B-008) 88195207-88268822 protein_coding
ENST00000507872 (TMEM161B-009) 88202684-88268819 nonsense_mediated_decay
ENST00000509387 (TMEM161B-003) 88202943-88268857 protein_coding
ENST00000510089 (TMEM161B-004) 88195169-88268848 nonsense_mediated_decay
ENST00000511087 (TMEM161B-005) 88195047-88268799 nonsense_mediated_decay
ENST00000511218 (TMEM161B-010) 88195828-88220631 protein_coding
ENST00000512429 (TMEM161B-007) 88196117-88268829 protein_coding
ENST00000513487 (TMEM161B-012) 88207035-88268848 processed_transcript
ENST00000514135 (TMEM161B-006) 88189633-88268830 protein_coding
ENST00000515293 (TMEM161B-016) 88196350-88198451 processed_transcript
ENST00000515477 (TMEM161B-014) 88220615-88268847 processed_transcript
ENSG00000207129 (RNA5SP187)
RNA, 5S ribosomal pseudogene 187 		ENST00000384400 (RNA5SP187-201) 88274258-88274376 rRNA
ENSG00000240083 (RPS3AP22)
ribosomal protein S3a pseudogene 22 		ENST00000488297 (RPS3AP22-001) 88381957-88382725 processed_pseudogene
ENSG00000250306 (CTC-498M16.3)
 ENST00000514065 (CTC-498M16.3-001) 88382948-88383260 processed_pseudogene
ENSG00000250377 (CTC-467M3.3)
 ENST00000508719 (CTC-467M3.3-001) 88692645-88693972 lincRNA
ENSG00000250705 (CTC-470C15.1)
 ENST00000509149 (CTC-470C15.1-001) 88602780-88603117 processed_pseudogene
ENSG00000271904 (CTC-498M16.4)
 ENST00000504034 (CTC-498M16.4-001) 88433892-88498697 lincRNA
ENSG00000279188 (AC010243.1)
 ENST00000623372 (AC010243.1-201) 88218891-88219263 pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0008S7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs268 VISTA 10090 13:83759503-84360615
GeneTranscriptPositionBiotype
ENSMUSG00000035762 (Tmem161b)
transmembrane protein 161B 		ENSMUST00000057495 (Tmem161b-001) 84222314-84295870 protein_coding
ENSMUSG00000050334 (C130071C03Rik)
RIKEN cDNA C130071C03 gene 		ENSMUST00000052354 (C130071C03Rik-201) 83738881-83741307 lincRNA
ENSMUST00000131907 (C130071C03Rik-001) 83721381-83741308 lincRNA
ENSMUST00000182701 (C130071C03Rik-003) 83732566-83735521 lincRNA
ENSMUST00000182788 (C130071C03Rik-002) 83728106-83735669 lincRNA
ENSMUST00000185281 (C130071C03Rik-005) 83721381-83872680 lincRNA
ENSMUST00000187663 (C130071C03Rik-006) 83738863-83884194 lincRNA
ENSMUSG00000097292 (A230107N01Rik)
RIKEN cDNA A230107N01 gene 		ENSMUST00000180894 (A230107N01Rik-001) 84219581-84222175 antisense
ENSMUST00000185973 (A230107N01Rik-002) 84220610-84222100 antisense
ENSMUSG00000098087 (Gm17750)
predicted gene, 17750 		ENSMUST00000182477 (Gm17750-001) 84025297-84064772 lincRNA
ENSMUSG00000098245 (Gm26927)
predicted gene, 26927 		ENSMUST00000182385 (Gm26927-001) 84339149-84340113 processed_pseudogene
ENSMUSG00000100891 (RP23-392G15.1)
RIKEN cDNA 2810049E08 gene 		ENSMUST00000185600 (RP23-392G15.1-001) 83891208-83928710 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008S7_0001ENSG00000164180ENST00000296595ENST00000503194ENST00000503755ENST00000503943ENST00000506536ENST00000507872ENST00000509387ENST00000510089ENST00000511087ENST00000511218ENST00000512429ENST00000513487ENST00000514135ENST00000515293ENST00000515477ENSG00000207129ENST00000384400ENSG00000240083ENST00000488297ENSG00000250306ENST00000514065ENSG00000250377ENST00000508719ENSG00000250705ENST00000509149ENSG00000271904ENST00000504034ENSG00000279188ENST00000623372CIL_0008S7_0002ENSMUSG00000035762ENSMUST00000057495ENSMUSG00000050334ENSMUST00000052354ENSMUST00000131907ENSMUST00000182701ENSMUST00000182788ENSMUST00000185281ENSMUST00000187663ENSMUSG00000097292ENSMUST00000180894ENSMUST00000185973ENSMUSG00000098087ENSMUST00000182477ENSMUSG00000098245ENSMUST00000182385ENSMUSG00000100891ENSMUST00000185600
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008S7_0001ENSG00000164180ENST00000296595ENST00000506536ENST00000510089ENST00000511087ENST00000511218ENST00000514135ENST00000515477ENSG00000207129ENST00000384400ENSG00000240083ENST00000488297ENSG00000250306ENST00000514065ENSG00000250377ENST00000508719ENSG00000250705ENST00000509149ENSG00000271904ENST00000504034ENSG00000279188ENST00000623372CIL_0008S7_0002ENSMUSG00000035762ENSMUST00000057495ENSMUSG00000050334ENSMUST00000052354ENSMUST00000131907ENSMUST00000185281ENSMUSG00000097292ENSMUST00000180894ENSMUST00000185973ENSMUSG00000098087ENSMUST00000182477ENSMUSG00000098245ENSMUST00000182385ENSMUSG00000100891ENSMUST00000185600
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164180 ENST00000296595 0.498±0.00 N/A N/A 4.018±0.00 1.037±0.00 1.040±0.00 1.730±0.00 1.164±0.00 1.148±0.00 0.724±0.00 1.067±0.00 2.675±0.78 1.405±0.36 3.513±0.48
ENST00000503194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506536 0.765±0.00 1.190±0.00 N/A 3.069±0.00 N/A N/A N/A 2.479±0.00 N/A N/A N/A 0.893±0.00 N/A N/A
ENST00000507872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510089 0.150±0.00 0.380±0.00 N/A 0.825±0.04 0.306±0.00 0.185±0.00 0.349±0.00 0.851±0.00 0.341±0.20 0.143±0.00 N/A 0.479±0.13 0.133±0.00 1.020±0.00
ENST00000511087 N/A 0.772±0.00 N/A N/A N/A N/A N/A N/A 0.444±0.00 0.419±0.00 N/A N/A N/A N/A
ENST00000511218 N/A N/A N/A N/A N/A 1.264±0.00 N/A N/A N/A N/A 1.367±0.00 2.418±0.00 1.888±0.00 8.084±0.00
ENST00000512429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514135 N/A 1.356±0.00 N/A N/A N/A N/A N/A N/A 2.148±0.00 N/A N/A N/A N/A N/A
ENST00000515293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515477 N/A N/A N/A N/A N/A N/A N/A 3.905±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000207129 ENST00000384400 N/A 0.216±0.00 N/A 0.236±0.00 N/A N/A 0.389±0.00 0.868±0.00 N/A 2.270±0.00 N/A N/A N/A 0.795±0.00
ENSG00000240083 ENST00000488297 N/A N/A N/A 0.043±0.00 0.072±0.03 0.109±0.00 0.080±0.06 0.035±0.02 0.261±0.24 0.053±0.03 0.051±0.00 0.032±0.00 N/A 0.024±0.00
ENSG00000250306 ENST00000514065 N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A N/A 3.374±0.00 N/A N/A N/A
ENSG00000250377 ENST00000508719 N/A 0.032±0.00 N/A 0.330±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.03
ENSG00000250705 ENST00000509149 0.111±0.00 0.057±0.00 N/A 0.063±0.00 0.058±0.00 0.677±0.52 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000271904 ENST00000504034 N/A N/A N/A 1.940±1.61 N/A N/A N/A 0.105±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000279188 ENST00000623372 N/A N/A N/A N/A N/A N/A 0.100±0.02 N/A N/A N/A N/A 0.273±0.21 N/A 0.026±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035762 ENSMUST00000057495 2.272±0.94 2.055±0.56 3.574±0.60 7.057±3.96 1.707±0.76 1.971±1.24 2.204±0.28 2.470±0.71 2.740±1.30 1.703±0.80 2.315±0.40 2.031±0.55 4.769±2.09 5.568±2.41
ENSMUSG00000050334 ENSMUST00000052354 N/A N/A 0.171±0.06 73.278±64.03 N/A 0.064±0.00 0.013±0.00 0.124±0.02 0.128±0.22 N/A 0.020±0.01 0.009±0.00 0.035±0.01 N/A
ENSMUST00000131907 N/A N/A 0.041±0.00 5.707±2.69 N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A 0.004±0.00 N/A
ENSMUST00000182701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185281 N/A N/A N/A N/A N/A N/A N/A 0.129±0.01 N/A N/A 0.161±0.00 N/A N/A N/A
ENSMUST00000187663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097292 ENSMUST00000180894 0.051±0.01 0.125±0.02 0.165±0.00 0.667±0.21 0.128±0.05 N/A 0.067±0.02 0.096±0.02 0.129±0.04 0.196±0.00 0.041±0.02 0.162±0.09 0.049±0.04 0.109±0.07
ENSMUST00000185973 0.200±0.07 N/A 0.401±0.13 0.531±0.39 0.122±0.10 0.146±0.03 0.120±0.04 0.320±0.19 0.089±0.04 0.164±0.10 0.099±0.05 0.100±0.03 0.128±0.09 0.615±0.37
ENSMUSG00000098087 ENSMUST00000182477 0.117±0.00 N/A N/A 34.967±28.08 N/A N/A N/A 13.185±0.75 0.065±0.03 N/A N/A 0.394±0.00 0.066±0.03 0.190±0.00
ENSMUSG00000098245 ENSMUST00000182385 N/A N/A N/A 0.030±0.01 N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A 0.048±0.02
ENSMUSG00000100891 ENSMUST00000185600 N/A N/A N/A 0.724±0.41 N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A

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