C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine incorporator 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164300 SERINC5 9606 - 5:80111651-80256079 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000502747 SERINC5-003 80156994-80167180 retained_intron
  ENST00000507668 SERINC5-001 80138727-80256079 protein_coding
  ENST00000509193 SERINC5-004 80111651-80256019 protein_coding
  ENST00000512721 SERINC5-201 80146075-80256014 protein_coding
  ENST00000512972 SERINC5-005 80111651-80256019 nonsense_mediated_decay
  ENST00000513907 SERINC5-002 80177315-80255198 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000507668ENST00000512721
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000507668 18.380±0.00 2.350±0.00 1.511±0.00 5.811±4.28 2.471±0.97 7.170±3.88 1.285±0.48 6.605±2.75 7.126±5.56 3.600±1.21 0.351±0.00 9.546±0.43 4.997±1.97 15.086±1.39
ENST00000512721 N/A N/A 1.675±0.00 2.980±0.00 7.675±0.00 9.750±0.00 N/A 11.574±0.00 7.677±0.00 7.515±0.00 N/A 11.049±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TG CIL_0005TG_0002 CGP 5:79991311-80256079

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006658 ISS phosphatidylserine metabolic process
GO:0006665 IEA sphingolipid metabolic process
GO:0008654 IEA phospholipid biosynthetic process
GO:0015194 IEA L-serine transmembrane transporter activity
GO:0015825 IEA L-serine transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0042552 IEA myelination
GO:0043209 IEA myelin sheath
GO:0051347 ISS positive regulation of transferase activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008153 serinc5 serine incorporator 5 protein_coding Danio_rerio
ENSMUSG00000021703 Serinc5 serine incorporator 5 protein_coding Mus_musculus

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