C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine incorporator 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507668 SERINC5-001 ENSG00000164300 9606 - 5:80138727-80256079 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000507668
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000507668 18.380±0.00 2.350±0.00 1.511±0.00 5.811±4.28 2.471±0.97 7.170±3.88 1.285±0.48 6.605±2.75 7.126±5.56 3.600±1.21 0.351±0.00 9.546±0.43 4.997±1.97 15.086±1.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TG CIL_0005TG_0002 CGP 5:79991311-80256079

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006658 ISS phosphatidylserine metabolic process
GO:0006665 IEA sphingolipid metabolic process
GO:0008654 IEA phospholipid biosynthetic process
GO:0015194 IEA L-serine transmembrane transporter activity
GO:0015825 IEA L-serine transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0042552 IEA myelination
GO:0043209 IEA myelin sheath
GO:0051347 ISS positive regulation of transferase activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049488 Serinc5-201 protein_coding Mus_musculus 0 1219

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