C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gastrulation brain homeobox 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164900 GBX1 9606 - 7:151148589-151174745 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297537 GBX1-001 151148589-151167548 protein_coding
  ENST00000475831 GBX1-002 151149777-151174745 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartMuscleENST00000297537ENST00000475831
Transcript ID Breast Heart Muscle
ENST00000297537 0.036±0.00 0.118±0.00 0.073±0.00
ENST00000475831 N/A 0.062±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0001 VISTA 7:150668461-151272977
CIL_0004EO CIL_0004EO_0001 CGP 7:151085831-151174745
CIL_0007RX CIL_0007RX_0001 VISTA 7:151109813-151711422
CIL_0001BI CIL_0001BI_0002 CGP 7:151148589-151187832

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007628 IEA adult walking behavior
GO:0019230 IEA proprioception
GO:0021522 IEA spinal cord motor neuron differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0048663 IEA neuron fate commitment
GO:0097374 IEA sensory neuron axon guidance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071418 gbx1 gastrulation brain homeobox 1 protein_coding Danio_rerio
ENSMUSG00000067724 Gbx1 gastrulation brain homeobox 1 protein_coding Mus_musculus

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