C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 52B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165685 TMEM52B 9606 + 12:10170542-10191801 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298530 TMEM52B-001 10179013-10191801 protein_coding
  ENST00000334148 TMEM52B-003 10170630-10172418 processed_transcript
  ENST00000381923 TMEM52B-002 10170542-10191785 protein_coding
  ENST00000543484 TMEM52B-005 10179303-10186552 protein_coding
  ENST00000545924 TMEM52B-004 10170729-10175522 processed_transcript
  ENST00000546153 TMEM52B-006 10186397-10190263 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000298530ENST00000334148ENST00000381923ENST00000543484ENST00000546153
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000298530 N/A N/A 11.826±0.00 N/A N/A N/A N/A 18.419±0.00 N/A N/A N/A 0.017±0.00 0.508±0.00 0.028±0.00
ENST00000334148 0.100±0.00 N/A N/A N/A 0.300±0.00 N/A N/A N/A N/A 0.344±0.00 N/A 0.055±0.00 N/A N/A
ENST00000381923 0.099±0.00 0.140±0.00 7.010±0.00 0.264±0.02 0.026±0.01 0.010±0.00 0.011±0.00 N/A 0.009±0.00 0.296±0.08 0.032±0.00 0.072±0.05 1.586±0.25 0.069±0.00
ENST00000543484 N/A N/A N/A N/A N/A N/A N/A 40.866±0.00 N/A N/A N/A N/A N/A N/A
ENST00000546153 N/A N/A N/A 0.367±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.114±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000T7 CIL_0000T7_0001 CGP 12:10116777-10172138
CIL_0000T6 CIL_0000T6_0001 CGP 12:10158301-10191801
CIL_0000T9 CIL_0000T9_0001 CGP 12:10170542-10223130

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000030160 Tmem52b transmembrane protein 52B protein_coding Mus_musculus

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