C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000T9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165685-ENSG00000139112 CGP 9606 12:10170542-10223130
GeneTranscriptPositionBiotype
ENSG00000139112 (GABARAPL1)
GABA(A) receptor-associated protein like 1
ENST00000266458 (GABARAPL1-001) 10212805-10223130 protein_coding
ENST00000421801 (GABARAPL1-002) 10212836-10220831 protein_coding
ENST00000535576 (GABARAPL1-014) 10213440-10221852 protein_coding
ENST00000537201 (GABARAPL1-009) 10212922-10214689 nonsense_mediated_decay
ENST00000539170 (GABARAPL1-005) 10213440-10223110 protein_coding
ENST00000539289 (GABARAPL1-019) 10213429-10220525 processed_transcript
ENST00000539408 (GABARAPL1-010) 10212458-10214123 nonsense_mediated_decay
ENST00000540424 (GABARAPL1-003) 10212897-10223123 nonsense_mediated_decay
ENST00000541453 (GABARAPL1-012) 10212877-10221908 nonsense_mediated_decay
ENST00000541960 (GABARAPL1-020) 10213106-10223128 nonsense_mediated_decay
ENST00000542722 (GABARAPL1-017) 10212509-10222087 nonsense_mediated_decay
ENST00000543602 (GABARAPL1-018) 10212883-10220778 protein_coding
ENST00000544284 (GABARAPL1-008) 10212854-10221950 protein_coding
ENST00000545047 (GABARAPL1-021) 10212877-10220655 protein_coding
ENST00000545290 (GABARAPL1-015) 10213629-10221799 protein_coding
ENST00000545859 (GABARAPL1-011) 10212597-10220481 protein_coding
ENST00000545887 (GABARAPL1-013) 10212928-10221969 protein_coding
ENST00000546017 (GABARAPL1-004) 10213429-10223123 protein_coding
ENSG00000165685 (TMEM52B)
transmembrane protein 52B
ENST00000298530 (TMEM52B-001) 10179013-10191801 protein_coding
ENST00000334148 (TMEM52B-003) 10170630-10172418 processed_transcript
ENST00000381923 (TMEM52B-002) 10170542-10191785 protein_coding
ENST00000543484 (TMEM52B-005) 10179303-10186552 protein_coding
ENST00000545924 (TMEM52B-004) 10170729-10175522 processed_transcript
ENST00000546153 (TMEM52B-006) 10186397-10190263 retained_intron
ENSG00000173391 (OLR1)
oxidized low density lipoprotein (lectin-like) receptor 1
ENST00000309539 (OLR1-001) 10158301-10172138 protein_coding
ENST00000339968 (OLR1-010) 10160402-10167599 protein_coding
ENST00000432556 (OLR1-002) 10159667-10172132 protein_coding
ENST00000536989 (OLR1-014) 10159668-10160561 retained_intron
ENST00000538745 (OLR1-009) 10160347-10167663 protein_coding
ENST00000538873 (OLR1-013) 10160867-10167168 protein_coding
ENST00000539518 (OLR1-007) 10159901-10169182 protein_coding
ENST00000543414 (OLR1-006) 10160878-10170387 protein_coding
ENST00000543993 (OLR1-005) 10159584-10167599 protein_coding
ENST00000544577 (OLR1-003) 10159515-10172138 protein_coding
ENST00000545927 (OLR1-008) 10159618-10172117 protein_coding
CIL_0000T9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030160-ENSMUSG00000030161 CGP 10090 6:129512557-129542331
GeneTranscriptPositionBiotype
ENSMUSG00000030160 (Tmem52b)
transmembrane protein 52B
ENSMUST00000032263 (Tmem52b-201) 129512557-129519227 protein_coding
ENSMUSG00000030161 (Gabarapl1)
gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
ENSMUST00000032264 (Gabarapl1-201) 129533200-129542331 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000T9_0001ENSG00000139112ENST00000266458ENST00000421801ENST00000535576ENST00000537201ENST00000539170ENST00000539289ENST00000539408ENST00000540424ENST00000541453ENST00000541960ENST00000542722ENST00000543602ENST00000544284ENST00000545047ENST00000545290ENST00000545859ENST00000545887ENST00000546017ENSG00000165685ENST00000298530ENST00000334148ENST00000381923ENST00000543484ENST00000545924ENST00000546153ENSG00000173391ENST00000309539ENST00000339968ENST00000432556ENST00000536989ENST00000538745ENST00000538873ENST00000539518ENST00000543414ENST00000543993ENST00000544577ENST00000545927CIL_0000T9_0002ENSMUSG00000030160ENSMUST00000032263ENSMUSG00000030161ENSMUST00000032264
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000T9_0001ENSG00000139112ENST00000266458ENST00000421801ENST00000539170ENST00000541960ENST00000545887ENST00000546017ENSG00000165685ENST00000298530ENST00000334148ENST00000381923ENST00000543484ENST00000546153ENSG00000173391ENST00000309539ENST00000339968ENST00000432556ENST00000536989ENST00000538873ENST00000539518ENST00000544577CIL_0000T9_0002ENSMUSG00000030160ENSMUST00000032263ENSMUSG00000030161ENSMUST00000032264
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139112 ENST00000266458 91.808±0.00 11.088±0.00 7.460±0.00 62.318±11.07 20.429±17.34 28.909±26.33 67.529±54.78 72.324±53.55 13.457±6.39 77.351±72.32 33.262±19.59 20.170±14.51 126.831±17.52 13.260±3.59
ENST00000421801 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.942±0.00 N/A N/A N/A N/A
ENST00000535576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539170 N/A N/A N/A N/A N/A N/A N/A 41.406±0.00 N/A N/A N/A N/A N/A N/A
ENST00000539289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541960 N/A N/A 2.184±0.00 N/A 1.182±0.00 N/A N/A N/A N/A 1.491±0.00 N/A 1.693±0.00 N/A N/A
ENST00000542722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545887 N/A N/A N/A 55.355±0.00 6.156±0.00 N/A 27.655±0.00 N/A N/A N/A 24.911±0.00 N/A N/A N/A
ENST00000546017 N/A N/A 3.700±0.00 N/A 3.499±0.00 1.381±0.00 5.060±0.00 N/A 8.182±0.00 5.623±0.00 N/A 2.205±0.00 N/A N/A
ENSG00000165685 ENST00000298530 N/A N/A 11.826±0.00 N/A N/A N/A N/A 18.419±0.00 N/A N/A N/A 0.017±0.00 0.508±0.00 0.028±0.00
ENST00000334148 0.100±0.00 N/A N/A N/A 0.300±0.00 N/A N/A N/A N/A 0.344±0.00 N/A 0.055±0.00 N/A N/A
ENST00000381923 0.099±0.00 0.140±0.00 7.010±0.00 0.264±0.02 0.026±0.01 0.010±0.00 0.011±0.00 N/A 0.009±0.00 0.296±0.08 0.032±0.00 0.072±0.05 1.586±0.25 0.069±0.00
ENST00000543484 N/A N/A N/A N/A N/A N/A N/A 40.866±0.00 N/A N/A N/A N/A N/A N/A
ENST00000545924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546153 N/A N/A N/A 0.367±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.114±0.00
ENSG00000173391 ENST00000309539 N/A 0.076±0.00 N/A 0.975±0.16 0.415±0.00 N/A 0.077±0.02 1.003±0.00 N/A 12.622±3.87 N/A N/A 37.530±19.81 0.224±0.01
ENST00000339968 0.343±0.00 0.575±0.00 N/A N/A 0.330±0.00 N/A 0.219±0.00 N/A 0.071±0.00 N/A N/A N/A N/A 0.456±0.00
ENST00000432556 N/A N/A N/A N/A N/A N/A N/A N/A 0.174±0.00 N/A N/A N/A N/A N/A
ENST00000536989 N/A N/A N/A N/A N/A 0.611±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.305±0.00 N/A N/A
ENST00000539518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.607±0.00
ENST00000543414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.607±0.00
ENST00000545927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030160 ENSMUST00000032263 N/A N/A N/A 0.007±0.00 0.046±0.00 N/A N/A 44.333±3.96 0.011±0.01 0.030±0.01 0.017±0.00 0.039±0.02 0.146±0.06 0.009±0.00
ENSMUSG00000030161 ENSMUST00000032264 62.178±7.18 75.519±4.65 53.180±0.45 71.135±16.83 38.436±1.76 29.762±3.88 28.967±3.88 387.237±23.89 105.668±86.94 62.364±6.75 25.899±4.02 57.809±19.00 44.746±28.85 52.592±24.18

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