C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: loss of heterozygosity, 12, chromosomal region 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165714 LOH12CR1 9606 + 12:12357079-12469694 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298571 LOH12CR1-002 12357418-12465844 protein_coding
  ENST00000314565 LOH12CR1-001 12357121-12469694 protein_coding
  ENST00000542728 LOH12CR1-003 12357079-12465783 protein_coding
  ENST00000543990 LOH12CR1-004 12357358-12435885 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000298571ENST00000314565ENST00000542728
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000298571 N/A N/A N/A N/A N/A N/A 2.155±0.00 N/A N/A 10.831±8.67 7.463±0.00 25.904±0.00
ENST00000314565 N/A 0.283±0.00 1.232±0.26 0.527±0.00 0.112±0.04 0.505±0.09 0.555±0.15 0.270±0.00 0.771±0.00 1.054±0.94 1.113±0.26 1.727±0.72
ENST00000542728 2.056±0.00 1.360±0.00 3.995±0.00 N/A 1.419±0.00 N/A N/A 2.144±0.75 N/A N/A 1.738±0.17 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000KA CIL_0000KA_0001 CGP 12:12326056-12469694
CIL_0003I2 CIL_0003I2_0001 CGP 12:12357079-12562383

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077830 loh12cr1 loss of heterozygosity, 12, chromosomal region 1 homolog (human) protein_coding Danio_rerio
ENSMUSG00000042992 Loh12cr1 loss of heterozygosity, 12, chromosomal region 1 homolog (human) protein_coding Mus_musculus

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