C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003I2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165714-ENSG00000111266 CGP 9606 12:12357079-12562383
GeneTranscriptPositionBiotype
ENSG00000111266 (DUSP16)
dual specificity phosphatase 16 		ENST00000228862 (DUSP16-201) 12475897-12562383 protein_coding
ENST00000298573 (DUSP16-001) 12474210-12562383 protein_coding
ENST00000536236 (DUSP16-004) 12521327-12560886 processed_transcript
ENST00000539940 (DUSP16-003) 12521024-12561125 protein_coding
ENST00000541207 (DUSP16-002) 12521081-12561077 protein_coding
ENST00000545864 (DUSP16-005) 12477886-12506187 processed_transcript
ENSG00000165714 (LOH12CR1)
loss of heterozygosity, 12, chromosomal region 1 		ENST00000298571 (LOH12CR1-002) 12357418-12465844 protein_coding
ENST00000314565 (LOH12CR1-001) 12357121-12469694 protein_coding
ENST00000542728 (LOH12CR1-003) 12357079-12465783 protein_coding
ENST00000543990 (LOH12CR1-004) 12357358-12435885 retained_intron
ENSG00000255670 (RP11-253I19.3)
 ENST00000544086 (RP11-253I19.3-001) 12485353-12491581 lincRNA
ENSG00000271370 (RP11-253I19.4)
 ENST00000605743 (RP11-253I19.4-001) 12452103-12452481 processed_pseudogene
CIL_0003I2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042992-ENSMUSG00000030203 CGP 10090 6:134639627-134792625
GeneTranscriptPositionBiotype
ENSMUSG00000030203 (Dusp16)
dual specificity phosphatase 16 		ENSMUST00000100857 (Dusp16-001) 134715473-134792625 protein_coding
ENSMUST00000129433 (Dusp16-004) 134717615-134760872 protein_coding
ENSMUST00000148926 (Dusp16-003) 134720579-134758720 processed_transcript
ENSMUST00000149776 (Dusp16-002) 134737477-134791334 retained_intron
ENSMUSG00000042992 (Loh12cr1)
loss of heterozygosity, 12, chromosomal region 1 homolog (human) 		ENSMUST00000062755 (Loh12cr1-001) 134640940-134711184 protein_coding
ENSMUST00000166591 (Loh12cr1-201) 134639627-134711183 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003I2_0001ENSG00000111266ENST00000228862ENST00000298573ENST00000536236ENST00000539940ENST00000541207ENST00000545864ENSG00000165714ENST00000298571ENST00000314565ENST00000542728ENST00000543990ENSG00000255670ENST00000544086ENSG00000271370ENST00000605743CIL_0003I2_0002ENSMUSG00000030203ENSMUST00000100857ENSMUST00000129433ENSMUST00000148926ENSMUST00000149776ENSMUSG00000042992ENSMUST00000062755ENSMUST00000166591
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003I2_0001ENSG00000111266ENST00000228862ENST00000298573ENSG00000165714ENST00000298571ENST00000314565ENST00000542728ENSG00000255670ENST00000544086ENSG00000271370ENST00000605743CIL_0003I2_0002ENSMUSG00000030203ENSMUST00000100857ENSMUST00000129433ENSMUSG00000042992ENSMUST00000062755ENSMUST00000166591
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111266 ENST00000228862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.208±0.00 N/A N/A N/A
ENST00000298573 5.318±0.00 0.735±0.00 N/A 4.010±3.31 3.161±0.00 2.497±1.45 0.941±0.68 2.906±0.46 3.690±2.66 9.585±0.00 5.028±0.00 8.194±0.93 3.905±0.51 1.076±0.00
ENST00000536236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165714 ENST00000298571 N/A N/A N/A N/A N/A N/A N/A N/A 2.155±0.00 N/A N/A 10.831±8.67 7.463±0.00 25.904±0.00
ENST00000314565 N/A 0.283±0.00 N/A 1.232±0.26 0.527±0.00 N/A 0.112±0.04 0.505±0.09 0.555±0.15 0.270±0.00 0.771±0.00 1.054±0.94 1.113±0.26 1.727±0.72
ENST00000542728 2.056±0.00 1.360±0.00 N/A 3.995±0.00 N/A N/A 1.419±0.00 N/A N/A 2.144±0.75 N/A N/A 1.738±0.17 N/A
ENST00000543990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255670 ENST00000544086 0.311±0.00 N/A N/A 0.575±0.00 N/A 0.064±0.00 0.213±0.00 0.566±0.17 0.293±0.00 0.177±0.04 0.290±0.00 0.319±0.00 0.176±0.00 0.045±0.00
ENSG00000271370 ENST00000605743 0.222±0.00 0.192±0.00 N/A 0.202±0.11 N/A N/A N/A 0.188±0.00 N/A 0.117±0.00 N/A N/A 0.058±0.00 0.056±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030203 ENSMUST00000100857 6.487±2.33 8.684±1.11 12.794±2.09 2.742±1.06 10.543±0.41 6.884±2.12 4.146±0.25 5.959±1.14 5.652±2.81 11.465±0.60 4.419±0.61 5.589±3.53 7.198±6.18 5.175±1.83
ENSMUST00000129433 N/A N/A N/A 2.244±0.00 N/A N/A N/A N/A N/A N/A N/A 3.220±0.00 10.351±4.72 4.177±0.00
ENSMUST00000148926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042992 ENSMUST00000062755 6.990±0.29 16.207±0.77 7.778±1.15 8.523±2.65 7.457±2.62 5.978±0.26 4.565±0.42 6.152±0.90 4.860±0.96 5.426±0.54 6.784±2.06 10.445±2.95 3.284±1.03 2.839±1.55
ENSMUST00000166591 N/A N/A N/A N/A 1.270±0.13 N/A N/A 1.309±0.23 N/A N/A 3.515±1.57 4.821±2.82 2.172±1.33 N/A

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