C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 42
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165895 ARHGAP42 9606 + 11:100687653-100991937 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298815 ARHGAP42-201 100687676-100990925 protein_coding
  ENST00000524649 ARHGAP42-009 100770366-100859907 retained_intron
  ENST00000524892 ARHGAP42-003 100687653-100991937 protein_coding
  ENST00000525558 ARHGAP42-005 100839404-100859629 processed_transcript
  ENST00000529406 ARHGAP42-008 100770341-100913526 processed_transcript
  ENST00000529535 ARHGAP42-001 100959850-100988869 nonsense_mediated_decay
  ENST00000531183 ARHGAP42-006 100913500-100948535 protein_coding
  ENST00000534060 ARHGAP42-007 100738443-100913524 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000298815ENST00000524892ENST00000529535
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000298815 1.947±0.00 N/A 2.269±0.00 2.911±0.00 0.935±0.00 3.201±0.00 1.001±0.00 3.233±0.00 3.220±0.00 0.409±0.00 0.287±0.00
ENST00000524892 N/A 0.184±0.00 0.861±0.00 N/A 0.522±0.01 0.766±0.00 0.316±0.00 1.764±0.00 1.275±0.14 N/A 0.203±0.00
ENST00000529535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.505±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010654 ARHGAP42 (1 of 2) Rho GTPase activating protein 42 protein_coding Danio_rerio
ENSDARG00000056619 arhgap42a Rho GTPase activating protein 42a protein_coding Danio_rerio
ENSMUSG00000050730 Arhgap42 Rho GTPase activating protein 42 protein_coding Mus_musculus

Loading