C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 42
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050730 Arhgap42 10090 - 9:8994329-9239101 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000093893 Arhgap42-001 8994329-9239101 protein_coding
  ENSMUST00000182617 Arhgap42-002 9011238-9239101 retained_intron
  ENSMUST00000183182 Arhgap42-003 9147356-9239026 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093893ENSMUST00000182617ENSMUST00000183182
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093893 3.516±1.79 3.207±0.56 3.031±1.03 0.895±0.32 4.382±1.02 5.323±1.33 0.769±0.06 6.536±0.80 5.126±3.64 5.213±1.74 0.455±0.23 11.233±4.00 2.824±1.75 0.217±0.13
ENSMUST00000182617 3.233±0.00 11.179±2.70 N/A N/A 10.792±5.33 15.785±1.52 N/A 9.470±3.20 N/A 5.753±0.00 N/A 35.421±12.55 6.289±1.66 0.510±0.17
ENSMUST00000183182 N/A 6.330±2.45 N/A N/A N/A N/A N/A N/A 8.120±2.31 11.115±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CN CIL_0003CN_0002 CGP 9:8994329-10904775

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010654 ARHGAP42 (1 of 2) Rho GTPase activating protein 42 protein_coding Danio_rerio
ENSDARG00000056619 arhgap42a Rho GTPase activating protein 42a protein_coding Danio_rerio
ENSG00000165895 ARHGAP42 Rho GTPase activating protein 42 protein_coding Homo_sapiens

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