C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 7B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165914 TTC7B 9606 - 14:90524564-90816479 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328459 TTC7B-001 90524564-90816417 protein_coding
  ENST00000553948 TTC7B-004 90744918-90816479 protein_coding
  ENST00000553972 TTC7B-015 90540642-90644208 protein_coding
  ENST00000554462 TTC7B-009 90652841-90677845 protein_coding
  ENST00000554654 TTC7B-003 90540642-90644944 processed_transcript
  ENST00000555005 TTC7B-002 90540588-90689712 nonsense_mediated_decay
  ENST00000555239 TTC7B-008 90610794-90680527 nonsense_mediated_decay
  ENST00000555894 TTC7B-012 90541186-90618023 protein_coding
  ENST00000556490 TTC7B-010 90644048-90658018 processed_transcript
  ENST00000556749 TTC7B-011 90646948-90657447 retained_intron
  ENST00000556960 TTC7B-007 90578106-90585799 processed_transcript
  ENST00000557059 TTC7B-006 90578185-90593931 retained_intron
  ENST00000557187 TTC7B-014 90772650-90780796 processed_transcript
  ENST00000557292 TTC7B-013 90541318-90610776 protein_coding
  ENST00000557766 TTC7B-005 90689636-90786237 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328459ENST00000553948ENST00000553972ENST00000554462ENST00000555005ENST00000555239ENST00000555894ENST00000556490ENST00000557292ENST00000557766
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328459 N/A 0.341±0.00 0.132±0.00 0.438±0.00 N/A 0.084±0.00 0.089±0.00 0.308±0.00 0.181±0.00 0.168±0.12 0.221±0.00 0.192±0.07 N/A 0.321±0.05
ENST00000553948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.940±0.00 N/A N/A
ENST00000553972 5.876±0.00 3.826±0.00 N/A 14.756±0.00 6.368±0.00 7.777±0.00 N/A N/A 1.705±0.00 5.606±0.00 4.563±0.00 3.414±1.59 5.969±0.66 3.197±0.00
ENST00000554462 N/A N/A N/A N/A N/A 2.513±0.00 N/A 4.909±0.00 N/A N/A N/A 4.638±0.00 N/A N/A
ENST00000555005 9.700±0.00 3.003±0.00 1.849±0.00 15.967±3.53 4.976±4.11 4.686±3.69 5.680±3.88 3.690±1.69 3.061±0.69 2.297±1.83 4.470±1.48 2.558±1.98 7.703±2.80 3.968±0.00
ENST00000555239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.712±0.00 13.395±0.00 N/A
ENST00000555894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.872±0.00 N/A
ENST00000556490 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.706±0.00 N/A N/A N/A N/A
ENST00000557292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.441±0.00 N/A N/A N/A
ENST00000557766 12.841±0.00 N/A N/A N/A 12.790±0.00 N/A 7.180±5.10 6.396±0.00 4.142±0.00 N/A 7.634±0.00 1.511±0.00 7.526±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005CA CIL_0005CA_0001 CGP 14:90396502-90816479
CIL_0005CD CIL_0005CD_0001 CGP 14:90524564-91060636

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061207 ttc7b tetratricopeptide repeat domain 7B protein_coding Danio_rerio
ENSMUSG00000033530 Ttc7b tetratricopeptide repeat domain 7B protein_coding Mus_musculus

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