C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005CA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198668-ENSG00000165914 CGP 9606 14:90396502-90816479
GeneTranscriptPositionBiotype
ENSG00000165914 (TTC7B)
tetratricopeptide repeat domain 7B 		ENST00000328459 (TTC7B-001) 90524564-90816417 protein_coding
ENST00000553948 (TTC7B-004) 90744918-90816479 protein_coding
ENST00000553972 (TTC7B-015) 90540642-90644208 protein_coding
ENST00000554462 (TTC7B-009) 90652841-90677845 protein_coding
ENST00000554654 (TTC7B-003) 90540642-90644944 processed_transcript
ENST00000555005 (TTC7B-002) 90540588-90689712 nonsense_mediated_decay
ENST00000555239 (TTC7B-008) 90610794-90680527 nonsense_mediated_decay
ENST00000555894 (TTC7B-012) 90541186-90618023 protein_coding
ENST00000556490 (TTC7B-010) 90644048-90658018 processed_transcript
ENST00000556749 (TTC7B-011) 90646948-90657447 retained_intron
ENST00000556960 (TTC7B-007) 90578106-90585799 processed_transcript
ENST00000557059 (TTC7B-006) 90578185-90593931 retained_intron
ENST00000557187 (TTC7B-014) 90772650-90780796 processed_transcript
ENST00000557292 (TTC7B-013) 90541318-90610776 protein_coding
ENST00000557766 (TTC7B-005) 90689636-90786237 protein_coding
ENSG00000198668 (CALM1)
calmodulin 1 (phosphorylase kinase, delta) 		ENST00000356978 (CALM1-001) 90396983-90408261 protein_coding
ENST00000447653 (CALM1-004) 90397029-90405072 protein_coding
ENST00000544280 (CALM1-006) 90398262-90405107 protein_coding
ENST00000553422 (CALM1-013) 90401333-90404833 nonsense_mediated_decay
ENST00000553542 (CALM1-012) 90397056-90405048 protein_coding
ENST00000553630 (CALM1-003) 90397040-90405603 nonsense_mediated_decay
ENST00000553964 (CALM1-005) 90397932-90404807 retained_intron
ENST00000553995 (CALM1-010) 90397032-90404067 retained_intron
ENST00000554296 (CALM1-014) 90403632-90404746 retained_intron
ENST00000555132 (CALM1-016) 90397032-90398803 processed_transcript
ENST00000555267 (CALM1-011) 90399978-90404153 retained_intron
ENST00000556721 (CALM1-015) 90404168-90404785 retained_intron
ENST00000556757 (CALM1-009) 90397032-90401613 retained_intron
ENST00000557020 (CALM1-007) 90396502-90404496 protein_coding
ENST00000557123 (CALM1-008) 90397032-90400431 retained_intron
ENSG00000213315 (CTD-3035D6.1)
 ENST00000472287 (CTD-3035D6.1-001) 90766531-90766989 processed_pseudogene
ENSG00000233208 (LINC00642)
long intergenic non-protein coding RNA 642 		ENST00000419459 (LINC00642-001) 90455271-90458904 lincRNA
ENST00000442515 (LINC00642-003) 90455230-90458866 lincRNA
ENST00000444942 (LINC00642-002) 90455329-90458905 lincRNA
ENSG00000258437 (RP11-661G16.1)
 ENST00000554967 (RP11-661G16.1-001) 90675118-90676294 antisense
ENSG00000258678 (RP11-1078H9.1)
 ENST00000555413 (RP11-1078H9.1-001) 90452063-90455117 lincRNA
ENSG00000258716 (RP11-661G16.2)
 ENST00000553712 (RP11-661G16.2-001) 90697333-90699374 antisense
ENSG00000258935 (RP11-1078H9.2)
 ENST00000557622 (RP11-1078H9.2-001) 90567495-90569976 lincRNA
ENSG00000259789 (RP11-1078H9.6)
 ENST00000567837 (RP11-1078H9.6-001) 90489012-90491637 lincRNA
CIL_0005CA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001175-ENSMUSG00000033530 CGP 10090 12:100199435-100520822
GeneTranscriptPositionBiotype
ENSMUSG00000001175 (Calm1)
calmodulin 1 		ENSMUST00000001204 (Calm1-002) 100200144-100209806 protein_coding
ENSMUST00000110082 (Calm1-001) 100199435-100209806 protein_coding
ENSMUST00000127300 (Calm1-004) 100205403-100206495 retained_intron
ENSMUST00000153524 (Calm1-003) 100199529-100203937 retained_intron
ENSMUSG00000033530 (Ttc7b)
tetratricopeptide repeat domain 7B 		ENSMUST00000062957 (Ttc7b-201) 100300771-100520822 protein_coding
ENSMUSG00000096947 (Gm26723)
predicted gene, 26723 		ENSMUST00000180771 (Gm26723-201) 100208988-100209814 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005CA_0001ENSG00000165914ENST00000328459ENST00000553948ENST00000553972ENST00000554462ENST00000554654ENST00000555005ENST00000555239ENST00000555894ENST00000556490ENST00000556749ENST00000556960ENST00000557059ENST00000557187ENST00000557292ENST00000557766ENSG00000198668ENST00000356978ENST00000447653ENST00000544280ENST00000553422ENST00000553542ENST00000553630ENST00000553964ENST00000553995ENST00000554296ENST00000555132ENST00000555267ENST00000556721ENST00000556757ENST00000557020ENST00000557123ENSG00000213315ENST00000472287ENSG00000233208ENST00000419459ENST00000442515ENST00000444942ENSG00000258437ENST00000554967ENSG00000258678ENST00000555413ENSG00000258716ENST00000553712ENSG00000258935ENST00000557622ENSG00000259789ENST00000567837CIL_0005CA_0002ENSMUSG00000001175ENSMUST00000001204ENSMUST00000110082ENSMUST00000127300ENSMUST00000153524ENSMUSG00000033530ENSMUST00000062957ENSMUSG00000096947ENSMUST00000180771
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005CA_0001ENSG00000165914ENST00000328459ENST00000553948ENST00000553972ENST00000554462ENST00000555005ENST00000555239ENST00000555894ENST00000556490ENST00000557292ENST00000557766ENSG00000198668ENST00000356978ENST00000553542ENST00000553630ENST00000557020ENSG00000213315ENST00000472287ENSG00000233208ENST00000419459ENST00000442515ENST00000444942ENSG00000258437ENST00000554967ENSG00000258678ENST00000555413ENSG00000258716ENST00000553712ENSG00000258935ENST00000557622ENSG00000259789ENST00000567837CIL_0005CA_0002ENSMUSG00000001175ENSMUST00000001204ENSMUST00000110082ENSMUST00000127300ENSMUST00000153524ENSMUSG00000033530ENSMUST00000062957ENSMUSG00000096947ENSMUST00000180771
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165914 ENST00000328459 N/A 0.341±0.00 0.132±0.00 0.438±0.00 N/A 0.084±0.00 0.089±0.00 0.308±0.00 0.181±0.00 0.168±0.12 0.221±0.00 0.192±0.07 N/A 0.321±0.05
ENST00000553948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.940±0.00 N/A N/A
ENST00000553972 5.876±0.00 3.826±0.00 N/A 14.756±0.00 6.368±0.00 7.777±0.00 N/A N/A 1.705±0.00 5.606±0.00 4.563±0.00 3.414±1.59 5.969±0.66 3.197±0.00
ENST00000554462 N/A N/A N/A N/A N/A 2.513±0.00 N/A 4.909±0.00 N/A N/A N/A 4.638±0.00 N/A N/A
ENST00000554654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555005 9.700±0.00 3.003±0.00 1.849±0.00 15.967±3.53 4.976±4.11 4.686±3.69 5.680±3.88 3.690±1.69 3.061±0.69 2.297±1.83 4.470±1.48 2.558±1.98 7.703±2.80 3.968±0.00
ENST00000555239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.712±0.00 13.395±0.00 N/A
ENST00000555894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.872±0.00 N/A
ENST00000556490 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.706±0.00 N/A N/A N/A N/A
ENST00000556749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.441±0.00 N/A N/A N/A
ENST00000557766 12.841±0.00 N/A N/A N/A 12.790±0.00 N/A 7.180±5.10 6.396±0.00 4.142±0.00 N/A 7.634±0.00 1.511±0.00 7.526±0.00 N/A
ENSG00000198668 ENST00000356978 89.996±0.00 62.554±0.00 20.006±0.00 287.951±22.69 75.346±50.06 76.414±42.41 43.377±21.00 35.982±20.64 32.672±14.66 47.537±17.47 61.235±40.03 36.010±14.68 37.011±2.68 62.027±0.00
ENST00000447653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553542 N/A N/A 31.140±0.00 114.514±0.00 48.028±0.00 94.653±32.33 26.361±0.00 30.235±0.00 54.041±0.00 46.271±0.00 25.013±0.00 50.047±28.49 63.849±14.55 48.492±11.94
ENST00000553630 86.956±0.00 59.262±0.00 N/A N/A N/A 82.707±0.00 41.080±0.00 57.110±0.00 26.038±0.00 114.728±0.00 N/A 27.387±4.59 68.177±14.91 38.657±10.92
ENST00000553964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 72.475±0.00 N/A 86.292±0.00
ENST00000557123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213315 ENST00000472287 0.168±0.00 0.616±0.00 0.489±0.00 0.038±0.00 0.396±0.10 0.348±0.11 0.065±0.00 0.182±0.00 0.436±0.37 0.279±0.07 1.034±0.00 0.208±0.11 0.234±0.03 0.165±0.06
ENSG00000233208 ENST00000419459 N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.245±0.00
ENST00000442515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.03 0.495±0.00
ENST00000444942 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.150±0.00 N/A N/A 0.079±0.01 2.314±0.00
ENSG00000258437 ENST00000554967 N/A N/A N/A N/A N/A 0.082±0.00 N/A N/A 0.142±0.06 N/A N/A N/A N/A 0.021±0.00
ENSG00000258678 ENST00000555413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.735±0.56
ENSG00000258716 ENST00000553712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.348±0.00
ENSG00000258935 ENST00000557622 N/A N/A N/A 0.085±0.00 N/A N/A 0.035±0.00 N/A 0.100±0.00 N/A N/A N/A N/A 0.068±0.00
ENSG00000259789 ENST00000567837 N/A 0.041±0.00 N/A 0.008±0.00 0.007±0.00 N/A N/A 0.014±0.00 N/A 0.006±0.00 N/A 0.007±0.00 N/A 0.136±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001175 ENSMUST00000001204 N/A N/A N/A 60.284±0.00 N/A N/A N/A N/A N/A N/A N/A 22.009±9.47 55.312±0.00 28.654±0.00
ENSMUST00000110082 46.316±3.80 14.788±2.39 36.584±10.36 102.916±72.41 35.765±7.20 58.966±3.80 19.212±4.40 28.168±1.61 24.086±10.30 67.470±6.69 79.626±18.08 30.133±4.53 82.682±27.33 66.378±2.39
ENSMUST00000127300 N/A N/A N/A 1317.140±0.00 N/A N/A N/A N/A N/A N/A N/A 509.059±0.00 1117.003±178.37 671.140±0.00
ENSMUST00000153524 173.076±15.47 253.405±38.07 112.221±0.00 144.274±18.75 268.753±39.31 417.168±35.50 39.800±8.07 72.044±12.44 66.444±21.01 254.878±68.83 N/A 217.222±19.06 152.367±8.60 190.440±6.90
ENSMUSG00000033530 ENSMUST00000062957 25.646±13.98 17.063±3.15 6.300±0.24 20.822±13.98 14.809±3.68 4.041±0.86 3.810±0.81 13.061±2.90 2.959±0.68 12.269±1.39 3.642±0.00 17.654±4.33 21.870±11.11 2.083±0.62
ENSMUSG00000096947 ENSMUST00000180771 N/A N/A N/A 79.161±3.41 N/A N/A 21.344±0.38 N/A N/A N/A 65.892±13.82 N/A N/A N/A

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