C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: interferon, alpha-inducible protein 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165949 IFI27 9606 + 14:94104836-94116698 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000555081 IFI27-008 94110736-94112133 retained_intron
  ENST00000555819 IFI27-007 94110755-94114880 protein_coding
  ENST00000557700 IFI27-009 94110736-94112194 retained_intron
  ENST00000611954 IFI27-002 94110739-94115839 protein_coding
  ENST00000612499 IFI27-003 94112851-94116688 retained_intron
  ENST00000612813 IFI27-001 94110815-94116695 protein_coding
  ENST00000614204 IFI27-013 94104836-94115854 protein_coding
  ENST00000614288 IFI27-011 94114851-94116694 nonsense_mediated_decay
  ENST00000614648 IFI27-010 94115511-94116690 retained_intron
  ENST00000616764 IFI27-201 94110733-94116698 protein_coding
  ENST00000618200 IFI27-005 94110747-94116447 protein_coding
  ENST00000618863 IFI27-004 94110734-94116690 protein_coding
  ENST00000620066 IFI27-202 94110815-94116698 protein_coding
  ENST00000620396 IFI27-012 94110762-94116693 protein_coding
  ENST00000621160 IFI27-006 94110749-94116695 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000555819ENST00000612499ENST00000612813ENST00000614648ENST00000618200ENST00000618863ENST00000620066ENST00000620396ENST00000621160
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000555819 N/A N/A N/A N/A N/A N/A 6.216±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000612499 N/A N/A N/A N/A 2.797±0.00 1.443±0.00 N/A N/A N/A 2.027±0.00 N/A N/A N/A 0.943±0.00
ENST00000612813 N/A N/A N/A N/A N/A N/A N/A N/A 4.351±0.00 N/A N/A N/A N/A N/A
ENST00000614648 N/A N/A N/A N/A N/A N/A N/A 5.614±0.00 N/A N/A N/A N/A N/A N/A
ENST00000618200 58.763±0.00 26.736±0.00 N/A 10.060±0.00 47.906±0.00 26.442±0.00 37.946±0.00 24.285±0.00 10.246±0.00 210.390±0.00 9.506±0.00 67.705±40.61 100.997±10.89 30.890±0.99
ENST00000618863 65.222±0.00 19.344±0.00 9.424±0.00 12.850±0.00 29.123±2.13 26.330±8.25 26.239±0.00 9.446±4.47 7.391±2.85 58.415±40.82 5.809±1.73 32.710±19.29 155.566±90.18 24.396±16.88
ENST00000620066 N/A 9.089±0.00 N/A N/A N/A N/A 6.486±3.86 N/A N/A N/A N/A 26.541±0.00 N/A N/A
ENST00000620396 34.477±0.00 17.053±0.00 N/A 5.788±0.00 40.662±0.00 19.633±0.00 N/A N/A N/A N/A N/A 6.793±0.00 N/A 29.266±0.00
ENST00000621160 26.777±0.00 N/A N/A 19.941±0.00 55.741±0.00 25.322±0.00 19.328±10.47 23.248±11.00 13.330±0.00 125.324±103.72 21.456±3.60 54.399±32.63 160.871±86.67 12.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061B CIL_00061B_0006 CGP 14:94081282-94116698
CIL_00061B CIL_00061B_0007 CGP 14:94104836-94130253

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017489 zgc:123068 zgc:123068 protein_coding Danio_rerio
ENSDARG00000039243 zgc:152791 zgc:152791 protein_coding Danio_rerio
ENSDARG00000074217 si:dkey-188i13.6 si:dkey-188i13.6 protein_coding Danio_rerio
ENSDARG00000074754 si:dkey-188i13.9 si:dkey-188i13.9 protein_coding Danio_rerio
ENSDARG00000075151 si:dkey-188i13.10 si:dkey-188i13.10 protein_coding Danio_rerio
ENSDARG00000078389 si:dkey-188i13.7 si:dkey-188i13.7 protein_coding Danio_rerio
ENSDARG00000092895 si:dkey-188i13.11 si:dkey-188i13.11 protein_coding Danio_rerio
ENSMUSG00000064215 Ifi27 interferon, alpha-inducible protein 27 protein_coding Mus_musculus

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