C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ariadne RBR E3 ubiquitin protein ligase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166233 ARIH1 9606 + 15:72474326-72602985 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000379887 ARIH1-001 72474326-72602985 protein_coding
  ENST00000561770 ARIH1-006 72572126-72582133 nonsense_mediated_decay
  ENST00000561987 ARIH1-009 72561452-72582118 retained_intron
  ENST00000562891 ARIH1-010 72580731-72583551 protein_coding
  ENST00000563310 ARIH1-007 72581472-72586559 retained_intron
  ENST00000564062 ARIH1-003 72474645-72563500 protein_coding
  ENST00000565950 ARIH1-005 72566370-72580779 retained_intron
  ENST00000566063 ARIH1-008 72580558-72583290 retained_intron
  ENST00000567762 ARIH1-004 72474936-72544923 processed_transcript
  ENST00000570085 ARIH1-002 72474490-72561547 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379887ENST00000562891ENST00000563310ENST00000565950ENST00000566063
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379887 0.867±0.00 0.859±0.00 1.024±0.00 1.348±0.04 1.027±0.22 1.016±0.16 0.808±0.02 0.869±0.17 0.730±0.43 1.232±0.61 1.151±0.36 1.293±0.39 0.529±0.01 2.047±0.65
ENST00000562891 N/A N/A N/A N/A 8.328±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 47.341±0.00
ENST00000563310 9.946±0.00 7.056±0.00 3.304±0.00 6.837±1.05 6.922±0.98 7.226±1.45 5.321±2.57 5.913±2.13 5.456±1.14 8.194±1.05 8.049±5.14 10.683±3.55 9.818±3.86 12.032±0.92
ENST00000565950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 63.247±0.00
ENST00000566063 N/A N/A 20.410±0.00 N/A 17.092±0.00 25.445±0.00 11.456±0.00 15.363±0.00 18.750±0.00 30.302±0.00 16.188±0.00 34.395±0.00 N/A 61.463±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 TAS ubiquitin ligase complex
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006511 TAS ubiquitin-dependent protein catabolic process
GO:0008270 IDA:IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019787 TAS small conjugating protein ligase activity
GO:0031625 IPI ubiquitin protein ligase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003616 arih1 ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) protein_coding Danio_rerio
ENSDARG00000036870 arih1l ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like protein_coding Danio_rerio
ENSMUSG00000025234 Arih1 ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) protein_coding Mus_musculus

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