C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ariadne RBR E3 ubiquitin protein ligase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379887 ARIH1-001 ENSG00000166233 9606 + 15:72474326-72602985 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379887
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379887 0.867±0.00 0.859±0.00 1.024±0.00 1.348±0.04 1.027±0.22 1.016±0.16 0.808±0.02 0.869±0.17 0.730±0.43 1.232±0.61 1.151±0.36 1.293±0.39 0.529±0.01 2.047±0.65

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 TAS ubiquitin ligase complex
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006511 TAS ubiquitin-dependent protein catabolic process
GO:0008270 IDA:IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019787 TAS small conjugating protein ligase activity
GO:0031625 IPI ubiquitin protein ligase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171975 Arih1-001 protein_coding Mus_musculus 0 5276
ENSMUST00000165322 Arih1-007 protein_coding Mus_musculus 0 2126
ENSMUST00000026264 Arih1-002 nonsense_mediated_decay Mus_musculus 0 1779
ENSDART00000019581 arih1-001 protein_coding Danio_rerio 0 1393
ENSMUST00000168456 Arih1-004 retained_intron Mus_musculus 0 767
ENSMUST00000168497 Arih1-006 retained_intron Mus_musculus 0 743
ENSMUST00000171856 Arih1-003 nonsense_mediated_decay Mus_musculus 0 588
ENSMUST00000168982 Arih1-005 retained_intron Mus_musculus 0 532
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000002 62
ENSMUST00000120488 Klhl22-001 protein_coding Mus_musculus 0.000009 60
ENSMUST00000123200 Paqr6-004 retained_intron Mus_musculus 0.000009 60
ENSMUST00000146537 Abl1-002 processed_transcript Mus_musculus 0.0001 57
ENSMUST00000155115 Adam17-004 retained_intron Mus_musculus 0.0001 57
ENSMUST00000165682 Rasl12-202 protein_coding Mus_musculus 0.0001 57

Loading