C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thioredoxin-related transmembrane protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166479 TMX3 9606 - 18:68673688-68715298 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299608 TMX3-001 68673688-68715298 protein_coding
  ENST00000443099 TMX3-004 68691014-68715057 protein_coding
  ENST00000544714 TMX3-014 68706280-68715092 protein_coding
  ENST00000562706 TMX3-003 68696936-68715058 protein_coding
  ENST00000564008 TMX3-008 68697226-68715065 nonsense_mediated_decay
  ENST00000564631 TMX3-002 68676839-68715077 nonsense_mediated_decay
  ENST00000565918 TMX3-006 68697226-68715069 nonsense_mediated_decay
  ENST00000566135 TMX3-010 68677028-68681322 processed_transcript
  ENST00000566887 TMX3-009 68688417-68691353 processed_transcript
  ENST00000569053 TMX3-005 68689687-68715035 nonsense_mediated_decay
  ENST00000569982 TMX3-007 68697931-68714443 nonsense_mediated_decay
  ENST00000578765 TMX3-011 68682925-68687977 retained_intron
  ENST00000578816 TMX3-012 68676710-68679577 retained_intron
  ENST00000580785 TMX3-013 68697376-68700423 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299608ENST00000562706ENST00000564631ENST00000566887ENST00000578816
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299608 5.289±0.00 4.772±0.00 2.971±0.00 6.571±2.07 3.213±0.61 4.388±0.63 3.454±1.30 5.619±0.00 1.302±0.88 6.396±2.37 0.585±0.08 2.791±0.43 2.661±0.77 4.086±0.06
ENST00000562706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.642±0.00 N/A N/A N/A
ENST00000564631 N/A N/A N/A N/A 5.456±0.00 N/A 2.191±0.00 N/A 5.766±0.00 N/A N/A 3.214±0.00 5.057±0.00 N/A
ENST00000566887 N/A N/A 61.096±0.00 N/A N/A N/A N/A 11.137±0.00 N/A N/A N/A N/A N/A N/A
ENST00000578816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.406±0.00 15.363±0.00 22.413±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000B6 CIL_0000B6_0002 CGP 18:67506582-68715298

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003756 IBA protein disulfide isomerase activity
GO:0005509 IEA calcium ion binding
GO:0005783 IBA endoplasmic reticulum
GO:0006457 IBA protein folding
GO:0008152 IEA metabolic process
GO:0009986 IDA cell surface
GO:0016021 IEA integral component of membrane
GO:0016853 IEA isomerase activity
GO:0034976 IBA response to endoplasmic reticulum stress
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038894 tmx3 thioredoxin-related transmembrane protein 3 protein_coding Danio_rerio
ENSMUSG00000024614 Tmx3 thioredoxin-related transmembrane protein 3 protein_coding Mus_musculus

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