C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: activating transcription factor 7 interacting protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166669 ATF7IP2 9606 + 16:10326434-10483638 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000324570 ATF7IP2-201 10430595-10483637 protein_coding
  ENST00000356427 ATF7IP2-202 10430595-10483637 protein_coding
  ENST00000396559 ATF7IP2-002 10386055-10483638 protein_coding
  ENST00000396560 ATF7IP2-001 10386055-10483638 protein_coding
  ENST00000535850 ATF7IP2-004 10386061-10482118 nonsense_mediated_decay
  ENST00000543967 ATF7IP2-003 10386059-10482486 protein_coding
  ENST00000561932 ATF7IP2-010 10386058-10429004 processed_transcript
  ENST00000562102 ATF7IP2-008 10386058-10430872 protein_coding
  ENST00000562396 ATF7IP2-005 10386061-10387741 retained_intron
  ENST00000562527 ATF7IP2-007 10386055-10430672 protein_coding
  ENST00000564797 ATF7IP2-015 10326434-10419620 processed_transcript
  ENST00000565450 ATF7IP2-014 10471924-10480963 retained_intron
  ENST00000565616 ATF7IP2-016 10454022-10457611 retained_intron
  ENST00000566316 ATF7IP2-009 10386058-10387741 retained_intron
  ENST00000568027 ATF7IP2-006 10428901-10483638 nonsense_mediated_decay
  ENST00000569900 ATF7IP2-012 10386061-10430843 protein_coding
  ENST00000569939 ATF7IP2-011 10386061-10430699 protein_coding
  ENST00000570163 ATF7IP2-013 10387092-10387737 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000324570ENST00000356427ENST00000396559ENST00000396560ENST00000535850ENST00000543967ENST00000562102ENST00000562396ENST00000565616ENST00000566316ENST00000568027ENST00000569939ENST00000570163
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000324570 N/A N/A N/A N/A 0.340±0.10 N/A N/A N/A N/A N/A 0.037±0.00 N/A 0.348±0.00 N/A
ENST00000356427 N/A N/A N/A 0.288±0.00 N/A N/A N/A 0.331±0.00 N/A N/A N/A 0.199±0.00 N/A 2.033±0.00
ENST00000396559 N/A N/A N/A N/A 0.233±0.00 N/A 0.571±0.00 N/A N/A N/A N/A 0.223±0.00 N/A 1.495±0.00
ENST00000396560 N/A N/A 0.165±0.00 N/A N/A N/A 1.036±0.00 0.531±0.00 N/A 1.242±0.00 N/A 0.232±0.04 N/A 2.248±1.25
ENST00000535850 N/A N/A 0.220±0.00 1.049±0.00 N/A 0.199±0.00 N/A 0.960±0.00 N/A N/A N/A N/A N/A 8.729±0.00
ENST00000543967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A 0.609±0.06 N/A
ENST00000562102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.805±0.00 1.646±0.00 N/A N/A
ENST00000562396 N/A N/A N/A N/A N/A N/A N/A 1.704±0.00 N/A N/A N/A 0.125±0.00 N/A N/A
ENST00000565616 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.387±0.00 N/A N/A N/A N/A
ENST00000566316 N/A 5.341±0.00 N/A 3.002±0.00 1.580±0.00 0.743±0.00 8.595±0.00 4.378±0.98 5.580±0.00 N/A N/A N/A 1.173±0.00 16.778±0.00
ENST00000568027 0.238±0.00 0.696±0.00 N/A N/A N/A 0.198±0.00 N/A N/A N/A N/A N/A 0.157±0.03 0.296±0.09 1.412±0.00
ENST00000569939 N/A N/A N/A 1.248±0.00 1.747±0.00 N/A N/A 9.497±0.00 N/A N/A N/A N/A N/A N/A
ENST00000570163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.528±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007XM CIL_0007XM_0001 VISTA 16:9925972-10527019
CIL_00074W CIL_00074W_0001 CGP 16:10326434-10580698

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089698 atf7ip2 activating transcription factor 7 interacting protein 2 protein_coding Danio_rerio
ENSMUSG00000039200 Atf7ip2 activating transcription factor 7 interacting protein 2 protein_coding Mus_musculus

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