C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007XM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1242 VISTA 9606 16:9925972-10527019
GeneTranscriptPositionBiotype
ENSG00000166669 (ATF7IP2)
activating transcription factor 7 interacting protein 2 		ENST00000324570 (ATF7IP2-201) 10430595-10483637 protein_coding
ENST00000356427 (ATF7IP2-202) 10430595-10483637 protein_coding
ENST00000396559 (ATF7IP2-002) 10386055-10483638 protein_coding
ENST00000396560 (ATF7IP2-001) 10386055-10483638 protein_coding
ENST00000535850 (ATF7IP2-004) 10386061-10482118 nonsense_mediated_decay
ENST00000543967 (ATF7IP2-003) 10386059-10482486 protein_coding
ENST00000561932 (ATF7IP2-010) 10386058-10429004 processed_transcript
ENST00000562102 (ATF7IP2-008) 10386058-10430872 protein_coding
ENST00000562396 (ATF7IP2-005) 10386061-10387741 retained_intron
ENST00000562527 (ATF7IP2-007) 10386055-10430672 protein_coding
ENST00000564797 (ATF7IP2-015) 10326434-10419620 processed_transcript
ENST00000565450 (ATF7IP2-014) 10471924-10480963 retained_intron
ENST00000565616 (ATF7IP2-016) 10454022-10457611 retained_intron
ENST00000566316 (ATF7IP2-009) 10386058-10387741 retained_intron
ENST00000568027 (ATF7IP2-006) 10428901-10483638 nonsense_mediated_decay
ENST00000569900 (ATF7IP2-012) 10386061-10430843 protein_coding
ENST00000569939 (ATF7IP2-011) 10386061-10430699 protein_coding
ENST00000570163 (ATF7IP2-013) 10387092-10387737 retained_intron
ENSG00000183454 (GRIN2A)
glutamate receptor, ionotropic, N-methyl D-aspartate 2A 		ENST00000330684 (GRIN2A-002) 9763061-10182406 protein_coding
ENST00000396573 (GRIN2A-001) 9758519-10182754 protein_coding
ENST00000396575 (GRIN2A-201) 9753409-9938554 protein_coding
ENST00000461292 (GRIN2A-004) 9763175-9763806 processed_transcript
ENST00000463531 (GRIN2A-003) 9764839-9769228 processed_transcript
ENST00000535259 (GRIN2A-202) 9762676-9938558 protein_coding
ENST00000562109 (GRIN2A-006) 9762675-10180432 protein_coding
ENST00000566665 (GRIN2A-005) 10179491-10182259 retained_intron
ENST00000566670 (GRIN2A-009) 9938154-10031580 processed_transcript
ENST00000566683 (GRIN2A-007) 9849887-10031564 processed_transcript
ENST00000568247 (GRIN2A-008) 9938067-9970795 processed_transcript
ENSG00000199482 (RNU6-633P)
RNA, U6 small nuclear 633, pseudogene 		ENST00000362612 (RNU6-633P-201) 10496272-10496374 snRNA
ENSG00000260468 (LINC01290)
long intergenic non-protein coding RNA 1290 		ENST00000566787 (LINC01290-001) 10514842-10528202 lincRNA
ENSG00000260756 (RP11-609N14.1)
 ENST00000569215 (RP11-609N14.1-001) 10351440-10352752 lincRNA
ENSG00000261647 (IMPDH1P11)
IMP (inosine monophosphate) dehydrogenase 1 pseudogene 11 		ENST00000567885 (IMPDH1P11-001) 10111382-10112885 processed_pseudogene
ENSG00000261810 (RP11-895K13.2)
 ENST00000569218 (RP11-895K13.2-001) 10033684-10037297 antisense
ENSG00000266439 (RN7SL493P)
RNA, 7SL, cytoplasmic 493, pseudogene 		ENST00000580401 (RN7SL493P-201) 10221775-10222073 misc_RNA
ENSG00000279662 (RP11-609N14.4)
 ENST00000624925 (RP11-609N14.4-001) 10445309-10449747 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0007XM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1242 VISTA 10090 16:9751117-10351975
GeneTranscriptPositionBiotype
ENSMUSG00000022505 (Emp2)
epithelial membrane protein 2 		ENSMUST00000078357 (Emp2-001) 10281749-10313968 protein_coding
ENSMUSG00000039200 (Atf7ip2)
activating transcription factor 7 interacting protein 2 		ENSMUST00000044005 (Atf7ip2-001) 10192712-10243051 protein_coding
ENSMUST00000100191 (Atf7ip2-005) 10192926-10227143 protein_coding
ENSMUST00000117220 (Atf7ip2-003) 10192922-10240814 protein_coding
ENSMUST00000119023 (Atf7ip2-002) 10192906-10237288 protein_coding
ENSMUST00000133674 (Atf7ip2-004) 10192947-10214231 retained_intron
ENSMUSG00000039209 (Rpl39l)
ribosomal protein L39-like 		ENSMUST00000044103 (Rpl39l-001) 10170228-10174911 protein_coding
ENSMUST00000121292 (Rpl39l-002) 10170226-10174630 protein_coding
ENSMUSG00000059003 (Grin2a)
glutamate receptor, ionotropic, NMDA2A (epsilon 1) 		ENSMUST00000032331 (Grin2a-201) 9577827-9992533 protein_coding
ENSMUST00000115835 (Grin2a-001) 9577710-9994921 protein_coding
ENSMUST00000156482 (Grin2a-002) 9991655-9994260 retained_intron
ENSMUSG00000098100 (Gm7572)
predicted gene 7572 		ENSMUST00000182616 (Gm7572-001) 10044965-10045730 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007XM_0001ENSG00000166669ENST00000324570ENST00000356427ENST00000396559ENST00000396560ENST00000535850ENST00000543967ENST00000562102ENST00000562396ENST00000565616ENST00000566316ENST00000568027ENST00000569939ENST00000570163ENSG00000183454ENST00000330684ENST00000396573ENST00000396575ENST00000463531ENST00000535259ENST00000566665ENST00000568247ENSG00000199482ENST00000362612ENSG00000260468ENST00000566787ENSG00000260756ENST00000569215ENSG00000261647ENST00000567885ENSG00000261810ENST00000569218ENSG00000266439ENST00000580401ENSG00000279662ENST00000624925CIL_0007XM_0002ENSMUSG00000022505ENSMUST00000078357ENSMUSG00000039200ENSMUST00000044005ENSMUST00000100191ENSMUST00000117220ENSMUST00000119023ENSMUST00000133674ENSMUSG00000039209ENSMUST00000044103ENSMUST00000121292ENSMUSG00000059003ENSMUST00000032331ENSMUST00000115835ENSMUST00000156482ENSMUSG00000098100ENSMUST00000182616
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166669 ENST00000324570 N/A N/A N/A N/A 0.340±0.10 N/A N/A N/A N/A N/A 0.037±0.00 N/A 0.348±0.00 N/A
ENST00000356427 N/A N/A N/A 0.288±0.00 N/A N/A N/A 0.331±0.00 N/A N/A N/A 0.199±0.00 N/A 2.033±0.00
ENST00000396559 N/A N/A N/A N/A 0.233±0.00 N/A 0.571±0.00 N/A N/A N/A N/A 0.223±0.00 N/A 1.495±0.00
ENST00000396560 N/A N/A 0.165±0.00 N/A N/A N/A 1.036±0.00 0.531±0.00 N/A 1.242±0.00 N/A 0.232±0.04 N/A 2.248±1.25
ENST00000535850 N/A N/A 0.220±0.00 1.049±0.00 N/A 0.199±0.00 N/A 0.960±0.00 N/A N/A N/A N/A N/A 8.729±0.00
ENST00000543967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A 0.609±0.06 N/A
ENST00000561932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.805±0.00 1.646±0.00 N/A N/A
ENST00000562396 N/A N/A N/A N/A N/A N/A N/A 1.704±0.00 N/A N/A N/A 0.125±0.00 N/A N/A
ENST00000562527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565616 N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.387±0.00 N/A N/A N/A N/A
ENST00000566316 N/A 5.341±0.00 N/A 3.002±0.00 1.580±0.00 0.743±0.00 8.595±0.00 4.378±0.98 5.580±0.00 N/A N/A N/A 1.173±0.00 16.778±0.00
ENST00000568027 0.238±0.00 0.696±0.00 N/A N/A N/A 0.198±0.00 N/A N/A N/A N/A N/A 0.157±0.03 0.296±0.09 1.412±0.00
ENST00000569900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569939 N/A N/A N/A 1.248±0.00 1.747±0.00 N/A N/A 9.497±0.00 N/A N/A N/A N/A N/A N/A
ENST00000570163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.528±0.00 N/A N/A
ENSG00000183454 ENST00000330684 N/A N/A N/A N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.188±0.00
ENST00000396573 0.003±0.00 N/A N/A N/A 0.036±0.02 0.212±0.00 0.385±0.22 N/A 0.069±0.06 N/A N/A 0.049±0.00 N/A 0.187±0.00
ENST00000396575 N/A N/A N/A 6.992±1.14 N/A N/A N/A 0.027±0.00 N/A N/A N/A 0.069±0.06 N/A 0.055±0.00
ENST00000461292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.293±0.00 N/A N/A N/A
ENST00000535259 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A N/A N/A 1.254±0.00
ENST00000562109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566665 N/A N/A N/A N/A 0.373±0.00 N/A N/A N/A N/A N/A 0.087±0.00 N/A N/A N/A
ENST00000566670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.100±0.00 N/A
ENSG00000199482 ENST00000362612 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.575±0.00 N/A N/A N/A N/A
ENSG00000260468 ENST00000566787 0.114±0.00 0.092±0.00 N/A N/A 1.459±0.00 0.230±0.00 0.293±0.19 0.250±0.00 0.100±0.08 3.964±3.58 N/A 0.123±0.04 0.147±0.08 0.083±0.00
ENSG00000260756 ENST00000569215 N/A N/A N/A 0.072±0.00 0.037±0.00 N/A N/A 0.100±0.00 0.054±0.00 N/A N/A 0.011±0.00 N/A 1.298±0.00
ENSG00000261647 ENST00000567885 N/A N/A 0.038±0.00 0.051±0.01 0.228±0.00 N/A N/A N/A 0.039±0.00 N/A N/A 0.105±0.00 N/A 0.029±0.00
ENSG00000261810 ENST00000569218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.347±0.24
ENSG00000266439 ENST00000580401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00
ENSG00000279662 ENST00000624925 0.162±0.00 1.215±0.00 N/A 0.503±0.42 N/A N/A 0.145±0.00 0.525±0.00 0.178±0.00 2.490±0.00 0.184±0.00 0.343±0.13 0.038±0.00 0.227±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022505 ENSMUST00000078357 30.573±16.02 5.966±0.52 25.696±0.44 2.559±0.64 20.263±3.88 25.318±3.65 21.452±0.91 8.551±3.68 4.967±1.96 123.105±23.61 2.151±0.36 23.840±9.22 4.798±2.97 1.002±0.53
ENSMUSG00000039200 ENSMUST00000044005 0.048±0.00 0.116±0.04 0.011±0.01 0.012±0.00 0.044±0.03 0.102±0.06 N/A 0.167±0.02 0.073±0.06 0.023±0.00 N/A 0.358±0.24 0.422±0.37 1.847±0.78
ENSMUST00000100191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.583±0.10 N/A
ENSMUST00000117220 N/A N/A N/A N/A N/A N/A N/A N/A 0.137±0.00 N/A N/A 0.364±0.07 0.387±0.15 4.481±0.00
ENSMUST00000119023 N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A N/A 0.389±0.00 0.276±0.24 12.543±0.00
ENSMUST00000133674 0.039±0.00 N/A N/A 0.013±0.00 N/A 0.104±0.00 N/A 0.054±0.00 0.010±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000039209 ENSMUST00000044103 0.218±0.15 N/A 0.205±0.06 0.646±0.12 1.409±0.75 N/A 0.171±0.11 0.058±0.00 0.566±0.40 0.374±0.15 0.054±0.00 0.376±0.21 0.941±0.76 143.741±71.34
ENSMUST00000121292 N/A N/A N/A N/A 1.110±0.00 N/A N/A 0.088±0.00 1.331±0.00 N/A 0.115±0.01 0.757±0.54 4.059±2.28 69.415±57.42
ENSMUSG00000059003 ENSMUST00000032331 0.008±0.00 0.024±0.01 0.013±0.00 N/A N/A 0.012±0.00 0.014±0.01 0.013±0.00 0.011±0.01 0.019±0.01 0.010±0.00 0.074±0.07 0.007±0.00 0.104±0.03
ENSMUST00000115835 N/A 0.036±0.02 0.020±0.00 0.905±0.80 N/A N/A N/A N/A 0.003±0.00 N/A N/A 0.017±0.00 0.005±0.00 0.031±0.00
ENSMUST00000156482 N/A 0.298±0.16 N/A N/A N/A N/A N/A N/A 0.015±0.00 0.024±0.00 N/A 0.064±0.02 N/A N/A
ENSMUSG00000098100 ENSMUST00000182616 N/A N/A 0.007±0.00 0.011±0.00 0.054±0.00 N/A N/A N/A 0.024±0.00 N/A 0.107±0.04 N/A 0.038±0.03 N/A

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