C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lactate dehydrogenase C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166796 LDHC 9606 + 11:18412307-18452058 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000280704 LDHC-002 18412331-18451243 protein_coding
  ENST00000396215 LDHC-005 18412323-18451243 nonsense_mediated_decay
  ENST00000535809 LDHC-010 18412718-18451127 protein_coding
  ENST00000536880 LDHC-006 18412718-18451127 protein_coding
  ENST00000537486 LDHC-007 18412718-18451127 protein_coding
  ENST00000539369 LDHC-004 18412360-18451243 nonsense_mediated_decay
  ENST00000541669 LDHC-001 18412307-18452058 protein_coding
  ENST00000544105 LDHC-009 18412718-18451127 protein_coding
  ENST00000545848 LDHC-003 18412360-18451243 nonsense_mediated_decay
  ENST00000546146 LDHC-008 18412718-18451127 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000280704ENST00000396215ENST00000535809ENST00000536880ENST00000537486ENST00000539369ENST00000541669ENST00000544105ENST00000545848ENST00000546146
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000280704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.00 N/A 67.902±30.22
ENST00000396215 N/A N/A N/A 0.294±0.00 N/A N/A N/A N/A N/A 0.067±0.00 0.092±0.00 N/A 79.398±37.97
ENST00000535809 N/A 0.438±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536880 N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 107.133±54.61
ENST00000537486 N/A N/A N/A 0.221±0.00 N/A N/A 0.036±0.00 N/A 0.098±0.00 N/A N/A N/A N/A
ENST00000539369 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.301±0.00 0.257±0.00 N/A N/A
ENST00000541669 0.022±0.00 0.189±0.00 N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A
ENST00000544105 N/A 0.223±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545848 N/A N/A N/A N/A 0.163±0.00 N/A N/A 0.088±0.00 N/A 0.116±0.00 0.285±0.11 N/A N/A
ENST00000546146 0.057±0.00 N/A N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A 0.127±0.04 0.063±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000369 CIL_000369_0001 CGP 11:18394388-18452058

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004459 IEA L-lactate dehydrogenase activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005929 IEA cilium
GO:0005975 IEA carbohydrate metabolic process
GO:0006090 IEA pyruvate metabolic process
GO:0006096 IEA glycolytic process
GO:0006754 IEA ATP biosynthetic process
GO:0016491 IEA oxidoreductase activity
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019244 IEA lactate biosynthetic process from pyruvate
GO:0019516 IEA lactate oxidation
GO:0030317 IEA sperm motility
GO:0031514 IEA motile cilium
GO:0044262 IEA cellular carbohydrate metabolic process
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040856 ldha lactate dehydrogenase A4 protein_coding Danio_rerio
ENSMUSG00000030851 Ldhc lactate dehydrogenase C protein_coding Mus_musculus

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