C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000369_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134333-ENSG00000166796 CGP 9606 11:18394388-18452058
GeneTranscriptPositionBiotype
ENSG00000134333 (LDHA)
lactate dehydrogenase A 		ENST00000227157 (LDHA-003) 18394586-18408218 protein_coding
ENST00000375710 (LDHA-023) 18399726-18407584 retained_intron
ENST00000379412 (LDHA-005) 18396278-18407847 protein_coding
ENST00000396222 (LDHA-002) 18394562-18408218 protein_coding
ENST00000422447 (LDHA-001) 18394388-18408425 protein_coding
ENST00000430553 (LDHA-010) 18394562-18407667 protein_coding
ENST00000460405 (LDHA-008) 18398866-18403784 retained_intron
ENST00000469976 (LDHA-006) 18394561-18397398 retained_intron
ENST00000478970 (LDHA-009) 18394612-18401025 protein_coding
ENST00000486690 (LDHA-017) 18396818-18405495 nonsense_mediated_decay
ENST00000494573 (LDHA-007) 18394563-18400360 retained_intron
ENST00000495052 (LDHA-004) 18394704-18400936 protein_coding
ENST00000535451 (LDHA-014) 18394563-18399521 protein_coding
ENST00000536528 (LDHA-021) 18394563-18403811 nonsense_mediated_decay
ENST00000537296 (LDHA-022) 18398630-18405574 retained_intron
ENST00000538451 (LDHA-024) 18402535-18407740 retained_intron
ENST00000539814 (LDHA-016) 18394563-18400934 nonsense_mediated_decay
ENST00000540430 (LDHA-201) 18396266-18408218 protein_coding
ENST00000541097 (LDHA-019) 18394563-18407158 nonsense_mediated_decay
ENST00000542179 (LDHA-020) 18396554-18407281 protein_coding
ENST00000543445 (LDHA-013) 18394560-18402891 protein_coding
ENST00000543695 (LDHA-015) 18394563-18403759 nonsense_mediated_decay
ENST00000545215 (LDHA-011) 18394563-18407642 nonsense_mediated_decay
ENST00000545467 (LDHA-018) 18394562-18400872 nonsense_mediated_decay
ENSG00000166796 (LDHC)
lactate dehydrogenase C 		ENST00000280704 (LDHC-002) 18412331-18451243 protein_coding
ENST00000396215 (LDHC-005) 18412323-18451243 nonsense_mediated_decay
ENST00000535809 (LDHC-010) 18412718-18451127 protein_coding
ENST00000536880 (LDHC-006) 18412718-18451127 protein_coding
ENST00000537486 (LDHC-007) 18412718-18451127 protein_coding
ENST00000539369 (LDHC-004) 18412360-18451243 nonsense_mediated_decay
ENST00000541669 (LDHC-001) 18412307-18452058 protein_coding
ENST00000544105 (LDHC-009) 18412718-18451127 protein_coding
ENST00000545848 (LDHC-003) 18412360-18451243 nonsense_mediated_decay
ENST00000546146 (LDHC-008) 18412718-18451127 protein_coding
ENSG00000256006 (AC084117.3)
 ENST00000496975 (AC084117.3-001) 18405609-18406731 sense_intronic
ENSG00000256734 (RP11-613F22.7)
 ENST00000535082 (RP11-613F22.7-001) 18450112-18450868 processed_pseudogene
CIL_000369_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063229-ENSMUSG00000030851 CGP 10090 7:46841475-46878142
GeneTranscriptPositionBiotype
ENSMUSG00000030851 (Ldhc)
lactate dehydrogenase C 		ENSMUST00000014545 (Ldhc-001) 46861203-46878142 protein_coding
ENSMUST00000126004 (Ldhc-003) 46861407-46876474 protein_coding
ENSMUST00000148565 (Ldhc-002) 46861322-46875788 protein_coding
ENSMUSG00000063229 (Ldha)
lactate dehydrogenase A 		ENSMUST00000005051 (Ldha-002) 46847131-46855626 protein_coding
ENSMUST00000048209 (Ldha-001) 46845839-46855627 protein_coding
ENSMUST00000092621 (Ldha-006) 46845863-46852003 protein_coding
ENSMUST00000124696 (Ldha-005) 46845843-46848145 retained_intron
ENSMUST00000125862 (Ldha-004) 46845843-46849045 processed_transcript
ENSMUST00000132157 (Ldha-008) 46847505-46850996 retained_intron
ENSMUST00000133062 (Ldha-007) 46846097-46849051 processed_transcript
ENSMUST00000147535 (Ldha-003) 46841475-46851994 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000369_0001ENSG00000134333ENST00000227157ENST00000379412ENST00000396222ENST00000422447ENST00000430553ENST00000486690ENST00000536528ENST00000542179ENST00000545215ENSG00000166796ENST00000280704ENST00000396215ENST00000535809ENST00000536880ENST00000537486ENST00000539369ENST00000541669ENST00000544105ENST00000545848ENST00000546146ENSG00000256006ENST00000496975ENSG00000256734ENST00000535082CIL_000369_0002ENSMUSG00000030851ENSMUST00000014545ENSMUST00000126004ENSMUST00000148565ENSMUSG00000063229ENSMUST00000005051ENSMUST00000048209
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134333 ENST00000227157 N/A N/A 5.631±0.00 N/A N/A 7.921±0.00 N/A N/A N/A N/A 20.537±0.00 N/A N/A N/A
ENST00000375710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000379412 86.087±0.00 57.218±0.00 N/A 45.787±0.00 60.097±0.00 71.105±0.00 25.103±0.00 97.913±0.00 N/A 51.816±0.00 22.753±0.00 78.699±28.37 41.016±13.93 29.533±12.50
ENST00000396222 N/A N/A 6.526±0.00 28.468±0.00 18.992±0.00 12.519±0.00 8.054±0.00 37.384±0.00 27.746±0.00 21.722±0.00 44.437±0.00 23.221±0.20 36.776±3.64 N/A
ENST00000422447 N/A N/A 4.715±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430553 N/A N/A 6.576±0.00 27.995±0.00 25.500±0.00 48.461±26.58 9.371±0.00 67.582±0.00 36.614±0.00 32.177±0.00 104.912±0.00 68.265±27.35 107.846±0.00 55.152±0.00
ENST00000460405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 252.364±0.00 224.640±0.00 103.493±0.00
ENST00000494573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 276.120±0.00 N/A 119.643±0.00
ENST00000537296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542179 N/A N/A N/A N/A 11.823±0.00 N/A N/A N/A N/A N/A N/A N/A 41.739±0.00 N/A
ENST00000543445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545215 219.482±0.00 155.820±0.00 7.122±0.00 35.016±11.28 135.052±124.00 81.902±61.45 11.827±6.93 116.293±0.00 122.736±0.00 43.483±0.00 29.575±2.23 28.695±0.00 37.081±0.00 110.172±0.00
ENST00000545467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166796 ENST00000280704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.00 N/A 67.902±30.22
ENST00000396215 N/A N/A N/A 0.294±0.00 N/A N/A N/A N/A N/A 0.067±0.00 N/A 0.092±0.00 N/A 79.398±37.97
ENST00000535809 N/A 0.438±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536880 N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 107.133±54.61
ENST00000537486 N/A N/A N/A 0.221±0.00 N/A N/A 0.036±0.00 N/A 0.098±0.00 N/A N/A N/A N/A N/A
ENST00000539369 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.301±0.00 N/A 0.257±0.00 N/A N/A
ENST00000541669 0.022±0.00 0.189±0.00 N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A
ENST00000544105 N/A 0.223±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545848 N/A N/A N/A N/A 0.163±0.00 N/A N/A 0.088±0.00 N/A 0.116±0.00 N/A 0.285±0.11 N/A N/A
ENST00000546146 0.057±0.00 N/A N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A 0.127±0.04 0.063±0.00 N/A
ENSG00000256006 ENST00000496975 0.251±0.00 0.638±0.00 N/A 0.119±0.00 0.585±0.08 0.179±0.00 0.652±0.50 0.342±0.19 0.235±0.00 0.514±0.00 N/A 0.539±0.22 N/A 0.235±0.00
ENSG00000256734 ENST00000535082 N/A 0.085±0.00 N/A 0.093±0.00 0.022±0.00 N/A N/A N/A N/A N/A 0.092±0.00 N/A N/A 2.835±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030851 ENSMUST00000014545 0.033±0.00 N/A 0.006±0.00 0.027±0.01 0.076±0.00 N/A 0.609±0.21 0.245±0.13 0.080±0.02 0.052±0.00 N/A 0.208±0.07 0.231±0.17 1247.104±207.12
ENSMUST00000126004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.355±0.16 0.188±0.00 N/A
ENSMUST00000148565 N/A N/A N/A N/A 0.075±0.01 N/A 0.357±0.18 0.288±0.15 N/A N/A N/A 0.350±0.33 0.379±0.22 2810.580±0.00
ENSMUSG00000063229 ENSMUST00000005051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 426.215±144.13
ENSMUST00000048209 556.530±124.01 156.780±24.96 159.968±8.40 75.984±35.16 787.375±305.56 497.340±46.86 339.993±19.73 317.029±14.57 459.743±208.86 173.193±21.61 1404.629±78.11 235.916±63.92 369.288±196.12 52.193±23.72
ENSMUST00000092621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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