C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 15 open reading frame 48
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166920 C15orf48 9606 + 15:45430529-45448761 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344300 C15orf48-001 45430607-45433449 protein_coding
  ENST00000396650 C15orf48-002 45430529-45433342 protein_coding
  ENST00000558435 C15orf48-003 45430579-45448761 protein_coding
  ENST00000558632 C15orf48-004 45430611-45431325 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLungOvaryPlacentaTestisENST00000344300ENST00000396650
Transcript ID Colon Lung Ovary Placenta Testis
ENST00000344300 18.515±0.00 N/A N/A N/A N/A
ENST00000396650 61.555±0.00 8.223±0.00 16.175±8.10 28.364±14.34 72.208±4.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QP CIL_0004QP_0002 CGP 15:45402331-45448761
CIL_0004C8 CIL_0004C8_0002 CGP 15:45430529-45522807

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005739 IEA mitochondrion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000092903 C18H15orf48 chromosome 15 open reading frame 48 protein_coding Danio_rerio
ENSMUSG00000033213 AA467197 expressed sequence AA467197 protein_coding Mus_musculus

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