C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RCC1 domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166965 RCCD1 9606 + 15:90954870-90963125 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000394258 RCCD1-001 90954870-90963125 protein_coding
  ENST00000554302 RCCD1-007 90955393-90957106 retained_intron
  ENST00000555155 RCCD1-006 90954881-90962324 protein_coding
  ENST00000555737 RCCD1-003 90954884-90962222 retained_intron
  ENST00000556333 RCCD1-005 90956740-90961769 nonsense_mediated_decay
  ENST00000556618 RCCD1-004 90955796-90962221 protein_coding
  ENST00000556774 RCCD1-009 90954889-90959978 processed_transcript
  ENST00000557266 RCCD1-002 90955382-90962342 retained_intron
  ENST00000557750 RCCD1-008 90959752-90961973 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartOvaryTestisENST00000394258ENST00000555155ENST00000556333
Transcript ID Brain Heart Ovary Testis
ENST00000394258 3.478±0.00 0.591±0.00 N/A N/A
ENST00000555155 N/A 4.146±0.00 N/A N/A
ENST00000556333 N/A N/A 49.649±0.00 28.751±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AY CIL_0008AY_0001 VISTA 15:90522657-91123707

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071074 rccd1 RCC1 domain containing 1 protein_coding Danio_rerio
ENSDARG00000086964 rccd1 RCC1 domain containing 1 protein_coding Danio_rerio
ENSMUSG00000038930 Rccd1 RCC1 domain containing 1 protein_coding Mus_musculus

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