C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 2B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167202 TBC1D2B 9606 - 15:77984036-78077724 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000300584 TBC1D2B-003 77994985-78077652 protein_coding
  ENST00000409931 TBC1D2B-001 77994986-78077724 protein_coding
  ENST00000418039 TBC1D2B-013 77994987-77999381 retained_intron
  ENST00000435468 TBC1D2B-004 78024416-78066123 protein_coding
  ENST00000459715 TBC1D2B-008 77998519-78001663 processed_transcript
  ENST00000465531 TBC1D2B-012 77984036-78001684 protein_coding
  ENST00000472786 TBC1D2B-009 78002482-78017286 retained_intron
  ENST00000482562 TBC1D2B-005 78044997-78054001 processed_transcript
  ENST00000486703 TBC1D2B-002 78024401-78025628 retained_intron
  ENST00000491479 TBC1D2B-006 77998116-78001954 retained_intron
  ENST00000492078 TBC1D2B-007 77998244-78001666 processed_transcript
  ENST00000497942 TBC1D2B-011 78001704-78003579 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000300584ENST00000409931ENST00000418039ENST00000435468ENST00000472786
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000300584 7.028±0.00 6.112±0.00 N/A 1.075±0.61 5.426±3.68 6.936±5.00 1.820±1.19 2.053±0.67 3.619±1.01 7.043±3.68 0.884±0.00 10.701±9.25 7.594±1.38 8.800±3.03
ENST00000409931 2.146±0.00 N/A N/A 0.280±0.00 N/A N/A N/A 3.385±0.00 N/A N/A 0.822±0.00 N/A 2.280±0.00 N/A
ENST00000418039 N/A 4.097±0.00 0.729±0.00 0.493±0.00 1.141±0.00 N/A N/A N/A N/A 4.959±0.00 N/A 3.006±0.00 N/A 2.529±0.00
ENST00000435468 N/A N/A 2.306±0.00 N/A N/A N/A N/A 2.580±0.00 N/A N/A 0.907±0.00 4.925±0.00 N/A N/A
ENST00000472786 N/A N/A N/A N/A N/A N/A 0.522±0.00 N/A N/A N/A 0.386±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IPI protein binding
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061986 tbc1d2b TBC1 domain family, member 2B protein_coding Danio_rerio
ENSMUSG00000037410 Tbc1d2b TBC1 domain family, member 2B protein_coding Mus_musculus

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