C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated 33
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167523 SPATA33 9606 + 16:89657802-89671272 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301031 SPATA33-001 89657802-89671267 protein_coding
  ENST00000457689 SPATA33-003 89657838-89670297 nonsense_mediated_decay
  ENST00000564238 SPATA33-004 89657871-89661508 protein_coding
  ENST00000565890 SPATA33-002 89657829-89671272 nonsense_mediated_decay
  ENST00000566204 SPATA33-006 89657812-89669631 protein_coding
  ENST00000566857 SPATA33-008 89660828-89661508 processed_transcript
  ENST00000567827 SPATA33-007 89657861-89668044 nonsense_mediated_decay
  ENST00000568929 SPATA33-005 89658102-89661483 protein_coding
  ENST00000579310 SPATA33-201 89657804-89670456 protein_coding
  ENST00000611218 SPATA33-202 89658047-89670456 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverOvaryTestisENST00000301031ENST00000457689ENST00000565890ENST00000566204ENST00000579310
Transcript ID Heart Liver Ovary Testis
ENST00000301031 N/A 0.302±0.00 N/A N/A
ENST00000457689 N/A N/A N/A 22.208±0.00
ENST00000565890 0.068±0.00 N/A 0.502±0.00 N/A
ENST00000566204 N/A N/A N/A 47.538±0.00
ENST00000579310 N/A N/A N/A 64.230±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000334 CIL_000334_0001 CGP 16:89613308-89657845
CIL_000333 CIL_000333_0001 CGP 16:89644431-89671272
CIL_00032T CIL_00032T_0001 CGP 16:89657802-89696364

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000048478 Spata33 spermatogenesis associated 33 protein_coding Mus_musculus

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