C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leukocyte-associated immunoglobulin-like receptor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167613 LAIR1 9606 - 19:54351384-54370558 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000348231 LAIR1-003 54354675-54364865 protein_coding
  ENST00000391741 LAIR1-009 54355258-54364870 nonsense_mediated_decay
  ENST00000391742 LAIR1-001 54351384-54364957 protein_coding
  ENST00000391743 LAIR1-005 54353624-54370558 protein_coding
  ENST00000418556 LAIR1-010 54356237-54364867 nonsense_mediated_decay
  ENST00000420483 LAIR1-020 54356608-54364931 nonsense_mediated_decay
  ENST00000423853 LAIR1-012 54360695-54365114 processed_transcript
  ENST00000427131 LAIR1-022 54360959-54364931 processed_transcript
  ENST00000434277 LAIR1-002 54354675-54364995 protein_coding
  ENST00000436513 LAIR1-021 54356585-54364931 nonsense_mediated_decay
  ENST00000438193 LAIR1-015 54360982-54370491 protein_coding
  ENST00000440716 LAIR1-011 54355346-54364836 processed_transcript
  ENST00000460312 LAIR1-014 54356286-54357629 retained_intron
  ENST00000463489 LAIR1-019 54355980-54365090 processed_transcript
  ENST00000467269 LAIR1-006 54355267-54364807 retained_intron
  ENST00000468656 LAIR1-018 54356557-54365099 processed_transcript
  ENST00000474878 LAIR1-004 54355267-54364807 protein_coding
  ENST00000475389 LAIR1-007 54354675-54357347 retained_intron
  ENST00000480122 LAIR1-017 54360960-54368599 processed_transcript
  ENST00000484116 LAIR1-023 54360800-54364849 processed_transcript
  ENST00000498511 LAIR1-013 54355201-54361193 retained_intron
  ENST00000596835 LAIR1-024 54368189-54368700 retained_intron
  ENST00000622064 LAIR1-016 54358006-54360949 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000348231ENST00000391741ENST00000391742ENST00000391743ENST00000434277ENST00000438193ENST00000440716ENST00000460312ENST00000463489ENST00000484116
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000348231 N/A 7.638±0.00 N/A 0.704±0.00 N/A 0.727±0.00 0.959±0.00 N/A 0.455±0.00 13.165±0.00 0.818±0.16 3.165±0.00 9.810±3.57 1.784±0.00
ENST00000391741 N/A N/A N/A N/A N/A N/A N/A 0.740±0.00 N/A N/A N/A N/A N/A N/A
ENST00000391742 N/A N/A N/A 0.152±0.00 2.879±0.00 0.110±0.00 0.154±0.00 N/A 0.109±0.00 N/A 0.035±0.00 0.313±0.00 1.688±0.03 N/A
ENST00000391743 3.557±0.00 9.384±0.00 0.045±0.00 2.235±2.02 5.621±4.42 0.280±0.00 0.637±0.09 2.088±0.00 0.478±0.00 2.401±1.39 0.079±0.00 1.312±0.61 6.116±1.42 1.301±1.05
ENST00000434277 4.290±0.00 N/A N/A 0.303±0.00 14.105±0.00 N/A 1.622±0.00 1.008±0.76 1.010±0.29 4.481±0.00 N/A 2.325±0.00 10.272±2.22 N/A
ENST00000438193 N/A N/A N/A N/A N/A N/A N/A 0.333±0.00 N/A N/A N/A N/A N/A N/A
ENST00000440716 N/A N/A 0.729±0.00 N/A N/A N/A N/A N/A N/A 2.571±0.00 N/A N/A N/A N/A
ENST00000460312 N/A N/A 0.160±0.00 N/A N/A 0.796±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.744±0.00 N/A
ENST00000484116 N/A N/A N/A N/A N/A 1.513±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005M5 CIL_0005M5_0001 CGP 19:54351384-54436900

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002376 IEA immune system process
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000055541 Lair1 leukocyte-associated Ig-like receptor 1 protein_coding Mus_musculus

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