C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005M5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167613-ENSG00000167614 CGP 9606 19:54351384-54436900
GeneTranscriptPositionBiotype
ENSG00000167613 (LAIR1)
leukocyte-associated immunoglobulin-like receptor 1 		ENST00000348231 (LAIR1-003) 54354675-54364865 protein_coding
ENST00000391741 (LAIR1-009) 54355258-54364870 nonsense_mediated_decay
ENST00000391742 (LAIR1-001) 54351384-54364957 protein_coding
ENST00000391743 (LAIR1-005) 54353624-54370558 protein_coding
ENST00000418556 (LAIR1-010) 54356237-54364867 nonsense_mediated_decay
ENST00000420483 (LAIR1-020) 54356608-54364931 nonsense_mediated_decay
ENST00000423853 (LAIR1-012) 54360695-54365114 processed_transcript
ENST00000427131 (LAIR1-022) 54360959-54364931 processed_transcript
ENST00000434277 (LAIR1-002) 54354675-54364995 protein_coding
ENST00000436513 (LAIR1-021) 54356585-54364931 nonsense_mediated_decay
ENST00000438193 (LAIR1-015) 54360982-54370491 protein_coding
ENST00000440716 (LAIR1-011) 54355346-54364836 processed_transcript
ENST00000460312 (LAIR1-014) 54356286-54357629 retained_intron
ENST00000463489 (LAIR1-019) 54355980-54365090 processed_transcript
ENST00000467269 (LAIR1-006) 54355267-54364807 retained_intron
ENST00000468656 (LAIR1-018) 54356557-54365099 processed_transcript
ENST00000474878 (LAIR1-004) 54355267-54364807 protein_coding
ENST00000475389 (LAIR1-007) 54354675-54357347 retained_intron
ENST00000480122 (LAIR1-017) 54360960-54368599 processed_transcript
ENST00000484116 (LAIR1-023) 54360800-54364849 processed_transcript
ENST00000498511 (LAIR1-013) 54355201-54361193 retained_intron
ENST00000596835 (LAIR1-024) 54368189-54368700 retained_intron
ENST00000622064 (LAIR1-016) 54358006-54360949 protein_coding
ENSG00000167614 (TTYH1)
tweety family member 1 		ENST00000301194 (TTYH1-001) 54415431-54436900 protein_coding
ENST00000376530 (TTYH1-002) 54415450-54436719 protein_coding
ENST00000376531 (TTYH1-003) 54415526-54436719 protein_coding
ENST00000391739 (TTYH1-006) 54419196-54433711 nonsense_mediated_decay
ENST00000423529 (TTYH1-016) 54415219-54422255 protein_coding
ENST00000425969 (TTYH1-008) 54415510-54426768 nonsense_mediated_decay
ENST00000445095 (TTYH1-007) 54415465-54426728 protein_coding
ENST00000461302 (TTYH1-013) 54420668-54426733 processed_transcript
ENST00000462757 (TTYH1-017) 54415840-54422248 processed_transcript
ENST00000462769 (TTYH1-011) 54418262-54419536 processed_transcript
ENST00000467939 (TTYH1-015) 54436005-54436717 processed_transcript
ENST00000476757 (TTYH1-012) 54420699-54429353 processed_transcript
ENST00000476863 (TTYH1-014) 54434960-54436328 processed_transcript
ENST00000478036 (TTYH1-018) 54418389-54421343 processed_transcript
ENST00000487134 (TTYH1-005) 54415512-54436719 retained_intron
ENST00000489425 (TTYH1-004) 54426474-54436719 processed_transcript
ENST00000492920 (TTYH1-009) 54430813-54436472 processed_transcript
ENSG00000237955 (AC008746.10)
 ENST00000450173 (AC008746.10-001) 54379489-54379960 processed_pseudogene
ENSG00000268496 (CTD-2587H19.2)
 ENST00000596631 (CTD-2587H19.2-001) 54434183-54434665 sense_intronic
CIL_0005M5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055541-ENSMUSG00000030428 CGP 10090 7:4007073-4136706
GeneTranscriptPositionBiotype
ENSMUSG00000030428 (Ttyh1)
tweety homolog 1 (Drosophila) 		ENSMUST00000032594 (Ttyh1-007) 4119754-4135330 nonsense_mediated_decay
ENSMUST00000079415 (Ttyh1-002) 4119585-4135333 protein_coding
ENSMUST00000119661 (Ttyh1-005) 4119530-4135330 protein_coding
ENSMUST00000126971 (Ttyh1-006) 4119530-4134949 retained_intron
ENSMUST00000128317 (Ttyh1-011) 4130619-4131890 retained_intron
ENSMUST00000129423 (Ttyh1-001) 4119533-4136706 protein_coding
ENSMUST00000130150 (Ttyh1-003) 4119408-4125588 processed_transcript
ENSMUST00000132400 (Ttyh1-014) 4128226-4130119 retained_intron
ENSMUST00000134536 (Ttyh1-004) 4122149-4135407 retained_intron
ENSMUST00000139789 (Ttyh1-012) 4131137-4132034 retained_intron
ENSMUST00000140637 (Ttyh1-013) 4133030-4133972 retained_intron
ENSMUST00000148760 (Ttyh1-008) 4119556-4125619 processed_transcript
ENSMUST00000148951 (Ttyh1-010) 4129246-4133197 retained_intron
ENSMUST00000151959 (Ttyh1-009) 4120220-4125560 processed_transcript
ENSMUST00000153673 (Ttyh1-015) 4119622-4128265 nonsense_mediated_decay
ENSMUSG00000055541 (Lair1)
leukocyte-associated Ig-like receptor 1 		ENSMUST00000068865 (Lair1-201) 4007073-4063204 protein_coding
ENSMUST00000086400 (Lair1-202) 4007073-4063204 protein_coding
ENSMUST00000086401 (Lair1-001) 4008059-4063174 protein_coding
ENSMUST00000108600 (Lair1-005) 4009663-4063141 protein_coding
ENSMUST00000119711 (Lair1-006) 4027203-4063148 protein_coding
ENSMUST00000131126 (Lair1-004) 4009573-4063116 nonsense_mediated_decay
ENSMUST00000136616 (Lair1-002) 4008980-4063161 nonsense_mediated_decay
ENSMUST00000149395 (Lair1-003) 4009007-4063139 nonsense_mediated_decay
ENSMUSG00000085886 (D030047H15Rik)
RIKEN cDNA D030047H15 gene 		ENSMUST00000148318 (D030047H15Rik-001) 4126340-4136926 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005M5_0001ENSG00000167613ENST00000348231ENST00000391741ENST00000391742ENST00000391743ENST00000418556ENST00000420483ENST00000423853ENST00000427131ENST00000434277ENST00000436513ENST00000438193ENST00000440716ENST00000460312ENST00000463489ENST00000467269ENST00000468656ENST00000474878ENST00000475389ENST00000480122ENST00000484116ENST00000498511ENST00000596835ENST00000622064ENSG00000167614ENST00000301194ENST00000376530ENST00000376531ENST00000391739ENST00000423529ENST00000425969ENST00000445095ENST00000461302ENST00000462757ENST00000462769ENST00000467939ENST00000476757ENST00000476863ENST00000478036ENST00000487134ENST00000489425ENST00000492920ENSG00000237955ENST00000450173ENSG00000268496ENST00000596631CIL_0005M5_0002ENSMUSG00000030428ENSMUST00000032594ENSMUST00000079415ENSMUST00000119661ENSMUST00000126971ENSMUST00000128317ENSMUST00000129423ENSMUST00000130150ENSMUST00000132400ENSMUST00000134536ENSMUST00000139789ENSMUST00000140637ENSMUST00000148760ENSMUST00000148951ENSMUST00000151959ENSMUST00000153673ENSMUSG00000055541ENSMUST00000068865ENSMUST00000086400ENSMUST00000086401ENSMUST00000108600ENSMUST00000119711ENSMUST00000131126ENSMUST00000136616ENSMUST00000149395ENSMUSG00000085886ENSMUST00000148318
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005M5_0001ENSG00000167613ENST00000348231ENST00000391741ENST00000391742ENST00000391743ENST00000434277ENST00000438193ENST00000440716ENST00000460312ENST00000463489ENST00000484116ENSG00000167614ENST00000301194ENST00000376530ENST00000376531ENST00000391739ENST00000425969ENST00000467939ENST00000476757ENST00000489425ENST00000492920ENSG00000237955ENST00000450173ENSG00000268496ENST00000596631CIL_0005M5_0002ENSMUSG00000030428ENSMUST00000032594ENSMUST00000079415ENSMUST00000119661ENSMUST00000126971ENSMUST00000129423ENSMUST00000130150ENSMUST00000134536ENSMUST00000140637ENSMUST00000148760ENSMUST00000148951ENSMUSG00000055541ENSMUST00000068865ENSMUST00000086400ENSMUST00000086401ENSMUST00000108600ENSMUST00000119711ENSMUST00000131126ENSMUST00000136616ENSMUST00000149395ENSMUSG00000085886ENSMUST00000148318
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167613 ENST00000348231 N/A 7.638±0.00 N/A 0.704±0.00 N/A 0.727±0.00 0.959±0.00 N/A 0.455±0.00 13.165±0.00 0.818±0.16 3.165±0.00 9.810±3.57 1.784±0.00
ENST00000391741 N/A N/A N/A N/A N/A N/A N/A 0.740±0.00 N/A N/A N/A N/A N/A N/A
ENST00000391742 N/A N/A N/A 0.152±0.00 2.879±0.00 0.110±0.00 0.154±0.00 N/A 0.109±0.00 N/A 0.035±0.00 0.313±0.00 1.688±0.03 N/A
ENST00000391743 3.557±0.00 9.384±0.00 0.045±0.00 2.235±2.02 5.621±4.42 0.280±0.00 0.637±0.09 2.088±0.00 0.478±0.00 2.401±1.39 0.079±0.00 1.312±0.61 6.116±1.42 1.301±1.05
ENST00000418556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434277 4.290±0.00 N/A N/A 0.303±0.00 14.105±0.00 N/A 1.622±0.00 1.008±0.76 1.010±0.29 4.481±0.00 N/A 2.325±0.00 10.272±2.22 N/A
ENST00000436513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438193 N/A N/A N/A N/A N/A N/A N/A 0.333±0.00 N/A N/A N/A N/A N/A N/A
ENST00000440716 N/A N/A 0.729±0.00 N/A N/A N/A N/A N/A N/A 2.571±0.00 N/A N/A N/A N/A
ENST00000460312 N/A N/A 0.160±0.00 N/A N/A 0.796±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.744±0.00 N/A
ENST00000467269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484116 N/A N/A N/A N/A N/A 1.513±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167614 ENST00000301194 N/A N/A N/A 31.153±0.00 N/A N/A 0.085±0.04 N/A N/A N/A N/A 0.159±0.00 0.385±0.00 N/A
ENST00000376530 0.050±0.00 N/A N/A 126.053±0.00 18.692±0.00 0.771±0.53 0.162±0.00 N/A N/A 0.779±0.00 N/A 1.561±1.33 N/A 7.192±0.00
ENST00000376531 N/A N/A N/A N/A N/A 1.372±0.00 0.196±0.00 N/A N/A N/A N/A 1.909±0.00 0.263±0.00 20.495±13.42
ENST00000391739 0.044±0.00 0.913±0.00 N/A N/A N/A N/A 0.097±0.00 0.133±0.10 0.024±0.00 0.071±0.01 N/A 0.033±0.00 0.022±0.00 N/A
ENST00000423529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425969 N/A N/A N/A N/A N/A 3.174±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467939 0.172±0.00 N/A N/A N/A N/A 1.214±0.00 N/A N/A N/A N/A N/A 1.278±0.00 0.931±0.62 46.230±0.00
ENST00000476757 0.320±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A
ENST00000476863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489425 N/A N/A N/A N/A N/A N/A 0.273±0.00 0.452±0.00 0.058±0.00 N/A 0.110±0.00 1.289±0.00 0.111±0.00 N/A
ENST00000492920 N/A N/A N/A N/A 0.835±0.00 N/A N/A N/A N/A N/A N/A 0.779±0.00 N/A 12.638±4.91
ENSG00000237955 ENST00000450173 N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 0.099±0.00 N/A N/A N/A 0.140±0.09 N/A
ENSG00000268496 ENST00000596631 N/A N/A 1.911±0.00 N/A 1.183±0.00 N/A N/A N/A 2.381±0.00 3.398±0.00 N/A 0.422±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030428 ENSMUST00000032594 0.287±0.00 N/A N/A 36.444±18.66 N/A 1.616±0.35 0.123±0.00 0.293±0.12 N/A 0.228±0.00 0.190±0.08 0.425±0.10 0.493±0.11 4.642±2.15
ENSMUST00000079415 N/A N/A N/A N/A N/A N/A N/A 0.170±0.00 N/A 0.130±0.00 N/A 0.335±0.01 N/A N/A
ENSMUST00000119661 N/A 0.967±0.44 0.836±0.03 22.040±2.03 1.221±0.59 N/A 0.257±0.05 0.209±0.07 0.084±0.00 N/A 0.164±0.01 0.767±0.40 0.769±0.20 5.731±1.95
ENSMUST00000126971 N/A 0.231±0.00 N/A 38.380±0.00 0.391±0.03 N/A N/A N/A 0.098±0.00 0.178±0.00 0.174±0.03 0.578±0.23 0.825±0.00 1.758±0.00
ENSMUST00000128317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129423 0.405±0.05 0.521±0.08 1.282±0.27 10.864±0.80 0.618±0.16 1.645±0.39 0.297±0.05 0.510±0.19 0.212±0.12 0.296±0.08 0.084±0.00 0.576±0.26 0.691±0.01 5.139±0.23
ENSMUST00000130150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.611±0.00 N/A N/A
ENSMUST00000132400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134536 N/A 0.390±0.00 N/A N/A 0.315±0.00 N/A N/A N/A N/A 0.142±0.01 0.099±0.02 N/A 0.304±0.00 N/A
ENSMUST00000139789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140637 N/A N/A N/A N/A N/A 12.630±2.32 1.283±0.00 2.890±0.00 0.742±0.00 N/A 0.455±0.00 3.851±0.00 N/A N/A
ENSMUST00000148760 N/A 2.604±0.95 N/A N/A N/A N/A N/A N/A N/A 0.388±0.00 N/A N/A N/A N/A
ENSMUST00000148951 0.822±0.15 N/A N/A N/A N/A 11.720±1.81 0.996±0.17 0.726±0.00 0.623±0.12 0.665±0.00 N/A 2.421±0.00 3.239±0.00 N/A
ENSMUST00000151959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000055541 ENSMUST00000068865 0.178±0.02 0.530±0.36 0.195±0.05 0.311±0.07 0.556±0.22 0.165±0.07 0.111±0.07 0.160±0.12 0.277±0.11 0.546±0.32 0.049±0.03 0.473±0.13 0.038±0.02 0.062±0.00
ENSMUST00000086400 N/A 0.190±0.02 N/A N/A 0.438±0.00 0.202±0.05 N/A N/A 0.148±0.03 N/A 0.035±0.00 N/A 0.041±0.02 N/A
ENSMUST00000086401 0.656±0.38 1.187±0.40 0.342±0.01 0.265±0.09 1.738±0.60 0.709±0.06 0.388±0.04 0.345±0.12 0.387±0.18 1.569±0.28 0.054±0.02 0.950±0.52 0.057±0.01 0.079±0.00
ENSMUST00000108600 N/A 1.222±0.07 N/A N/A N/A 0.682±0.17 0.474±0.17 N/A N/A N/A 0.115±0.00 2.099±0.47 N/A N/A
ENSMUST00000119711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A
ENSMUST00000131126 N/A N/A N/A 0.444±0.11 N/A 0.583±0.23 N/A N/A 0.586±0.00 0.843±0.00 0.040±0.00 0.994±0.47 0.053±0.00 N/A
ENSMUST00000136616 N/A N/A N/A N/A 0.813±0.00 N/A N/A 0.162±0.01 0.330±0.12 N/A 0.073±0.04 0.685±0.00 0.074±0.00 0.055±0.00
ENSMUST00000149395 0.866±0.58 0.652±0.00 N/A 0.516±0.00 1.248±0.42 0.750±0.45 0.278±0.02 0.200±0.01 0.446±0.26 0.976±0.13 0.176±0.00 0.785±0.51 0.120±0.07 0.179±0.10
ENSMUSG00000085886 ENSMUST00000148318 N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.03 N/A N/A 0.176±0.00 0.110±0.00 N/A

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