C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CDC42 effector protein (Rho GTPase binding) 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167617 CDC42EP5 9606 - 19:54465026-54473264 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301200 CDC42EP5-001 54465026-54473264 protein_coding
  ENST00000472703 CDC42EP5-002 54471506-54473171 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301200ENST00000472703
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301200 29.443±0.00 9.409±0.00 1.247±0.94 4.774±0.82 18.045±14.77 3.133±2.86 7.304±0.00 2.850±1.34 23.782±23.42 2.605±0.00 11.686±0.99 14.885±4.23 3.930±0.58
ENST00000472703 36.298±0.00 16.629±0.00 0.162±0.00 16.850±7.24 45.609±6.35 2.856±1.97 4.475±3.39 4.834±4.21 24.668±20.10 0.328±0.00 14.100±7.46 20.141±6.02 7.305±5.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005CN CIL_0005CN_0001 CGP 19:54461796-54473264

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0007254 IEA JNK cascade
GO:0007266 IEA Rho protein signal transduction
GO:0008360 IDA regulation of cell shape
GO:0016020 IDA membrane
GO:0017049 IPI GTP-Rho binding
GO:0030838 IDA positive regulation of actin filament polymerization
GO:0031274 IDA positive regulation of pseudopodium assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062390 cdc42ep1b CDC42 effector protein (Rho GTPase binding) 1b protein_coding Danio_rerio
ENSMUSG00000063838 Cdc42ep5 CDC42 effector protein (Rho GTPase binding) 5 protein_coding Mus_musculus

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