C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dynein, axonemal, assembly factor 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167646 DNAAF3 9606 - 19:55158661-55166722 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000391720 DNAAF3-002 55158663-55166651 protein_coding
  ENST00000455045 DNAAF3-201 55158661-55166722 protein_coding
  ENST00000524407 DNAAF3-003 55158663-55166552 protein_coding
  ENST00000526003 DNAAF3-015 55162133-55166576 protein_coding
  ENST00000526959 DNAAF3-010 55161127-55162349 retained_intron
  ENST00000527166 DNAAF3-007 55161334-55162818 processed_transcript
  ENST00000527223 DNAAF3-001 55158663-55166650 protein_coding
  ENST00000527292 DNAAF3-008 55161010-55162807 processed_transcript
  ENST00000528412 DNAAF3-006 55158663-55166621 nonsense_mediated_decay
  ENST00000528476 DNAAF3-011 55165817-55166722 processed_transcript
  ENST00000532817 DNAAF3-014 55162242-55166640 protein_coding
  ENST00000533527 DNAAF3-005 55158663-55162067 retained_intron
  ENST00000534170 DNAAF3-013 55162222-55166576 protein_coding
  ENST00000534214 DNAAF3-012 55162262-55166576 nonsense_mediated_decay
  ENST00000586877 DNAAF3-017 55165989-55166640 retained_intron
  ENST00000587789 DNAAF3-009 55158753-55160659 processed_transcript
  ENST00000588076 DNAAF3-020 55158794-55160689 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungOvaryTestisENST00000391720ENST00000524407ENST00000526003ENST00000527166ENST00000527223ENST00000528412ENST00000532817ENST00000533527ENST00000534214ENST00000587789ENST00000588076
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Ovary Testis
ENST00000391720 N/A 0.160±0.00 N/A N/A N/A 0.561±0.00 N/A 1.912±0.00 3.915±0.00 16.541±0.00
ENST00000524407 0.031±0.00 N/A N/A N/A N/A 0.655±0.00 N/A 3.072±0.00 N/A N/A
ENST00000526003 N/A N/A 0.145±0.00 0.263±0.00 N/A N/A 0.115±0.00 0.951±0.00 0.434±0.00 N/A
ENST00000527166 N/A N/A N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A
ENST00000527223 N/A N/A N/A N/A N/A N/A N/A 1.731±0.00 N/A 10.964±0.00
ENST00000528412 N/A N/A N/A N/A N/A 0.428±0.00 N/A N/A N/A N/A
ENST00000532817 N/A N/A N/A N/A N/A N/A N/A N/A 0.452±0.00 57.851±0.00
ENST00000533527 N/A N/A N/A N/A 0.150±0.00 N/A N/A N/A N/A N/A
ENST00000534214 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587789 N/A N/A N/A 0.158±0.00 N/A N/A N/A N/A N/A N/A
ENST00000588076 N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A 0.397±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TD CIL_0004TD_0001 CGP 19:55151767-55160671
CIL_0003OX CIL_0003OX_0001 CGP 19:55158661-55180441

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0044458 IMP motile cilium assembly
GO:0070286 IMP axonemal dynein complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036304 CABZ01055343.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092662 dnaaf3 dynein, axonemal, assembly factor 3 protein_coding Danio_rerio
ENSMUSG00000055809 Dnaaf3 dynein, axonemal assembly factor 3 protein_coding Mus_musculus

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