C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 444
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167685 ZNF444 9606 + 19:56132599-56160893 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337080 ZNF444-001 56141187-56160892 protein_coding
  ENST00000586123 ZNF444-004 56141303-56147123 protein_coding
  ENST00000587195 ZNF444-012 56141283-56155800 processed_transcript
  ENST00000587236 ZNF444-002 56154301-56160886 retained_intron
  ENST00000587467 ZNF444-009 56132599-56147181 protein_coding
  ENST00000587664 ZNF444-005 56141313-56160037 processed_transcript
  ENST00000588203 ZNF444-007 56143337-56147045 protein_coding
  ENST00000588358 ZNF444-003 56140951-56147128 protein_coding
  ENST00000591564 ZNF444-006 56146088-56147142 protein_coding
  ENST00000592171 ZNF444-008 56157309-56159967 processed_transcript
  ENST00000592949 ZNF444-013 56141321-56160893 protein_coding
  ENST00000593100 ZNF444-010 56141727-56147209 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337080ENST00000587236ENST00000591564ENST00000592949
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337080 2.474±0.00 N/A N/A 1.236±0.00 N/A N/A 0.127±0.00 N/A N/A N/A N/A 12.985±0.00 N/A N/A
ENST00000587236 0.307±0.00 1.159±0.00 0.092±0.00 1.086±0.00 0.777±0.00 1.019±0.00 0.402±0.00 1.172±0.00 0.529±0.04 0.095±0.00 N/A 0.596±0.17 0.323±0.00 0.597±0.00
ENST00000591564 N/A N/A N/A N/A N/A N/A 0.764±0.00 N/A 1.153±0.00 N/A N/A N/A N/A N/A
ENST00000592949 5.713±0.00 8.627±0.00 0.378±0.00 3.303±2.25 8.142±0.00 18.644±0.00 6.260±0.00 7.426±3.61 6.507±5.73 7.029±6.46 3.243±2.20 9.252±5.89 4.779±0.65 11.814±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045Z CIL_00045Z_0001 CGP 19:56087366-56160893
CIL_00046H CIL_00046H_0001 CGP 19:56132599-56185775

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA:IBA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000044876 Zfp444 zinc finger protein 444 protein_coding Mus_musculus

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